Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10i05
         (821 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    48   1e-05
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    48   1e-05
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    47   2e-05
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    40   0.002
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    37   0.020
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    36   0.035
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    32   0.43 
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical pr...    28   7.0  

>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 738
           FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 273 FKGALSNVFRGTGGALVLAIYDEIQKFL 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 738
           FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 273 FKGALSNVFRGTGGALVLAIYDEIQKFL 300


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 738
           FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 286 FKGALSNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 738
           FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 286 FKGALSNVFRGTGGALVLAIYDEIQKFI 313


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 738
           +KG  SNV R TGGA VL +YDEI+ ++
Sbjct: 273 YKGGLSNVFRATGGALVLTIYDEIQHLI 300


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKK 744
           +KGA +N+ R  GGA V+ LY+EI K
Sbjct: 279 YKGALANIFRSAGGALVMALYEEIHK 304


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 35.9 bits (79), Expect = 0.035
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 738
           F GA  N +RGTG A VL +Y+E++K +
Sbjct: 279 FHGALVNAIRGTGAALVLAIYNELQKYM 306


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 821 FKGAFSNVLRGTGGAFVLVLYDEIKKVL 738
           ++GA +N LR TGGA ++  Y E  K +
Sbjct: 271 YRGALTNSLRSTGGALIITFYYEFSKYM 298


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -1

Query: 821 FKGAFSNVLR-GTGGAFVLVLYDEI 750
           +KG    V+R G GGA +L++YDE+
Sbjct: 257 YKGLLPKVMRLGPGGAVMLIVYDEV 281


>Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical
           protein K10D11.4 protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -1

Query: 395 FSLVPEAKAELKIVQNFTLKEVYVLLSILNLSFVGIENFHFFIHSG 258
           FS+VP       IVQ+ ++ E    +S LNL+  G+E  H    SG
Sbjct: 253 FSIVPIPSHHHVIVQDASMYENISQISSLNLNEFGVEVVHLNASSG 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,889,688
Number of Sequences: 27780
Number of extensions: 364133
Number of successful extensions: 621
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)