Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10h15
(837 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein. 34 0.73
BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57k... 34 0.73
AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing ... 34 0.73
AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein. 34 0.73
BC038294-1|AAH38294.1| 303|Homo sapiens C10orf46 protein protein. 31 3.9
AY743663-1|AAU89709.1| 306|Homo sapiens cullin protein. 31 3.9
AL139407-1|CAH73727.1| 246|Homo sapiens chromosome 10 open read... 31 3.9
AK097728-1|BAC05153.1| 246|Homo sapiens protein ( Homo sapiens ... 31 3.9
AJ544771-1|CAD67614.1| 369|Homo sapiens hypothetical protein pr... 31 3.9
X57436-1|CAA40684.1| 440|Homo sapiens oligodentrocyte-myelin gl... 31 6.8
X51694-1|CAA35991.1| 433|Homo sapiens oligodendrocyte-myelin gl... 31 6.8
M63623-1|AAA59970.1| 440|Homo sapiens oligodendrocyte-myelin gl... 31 6.8
L02785-1|AAA58443.1| 764|Homo sapiens DRA protein. 31 6.8
BC025671-1|AAH25671.1| 764|Homo sapiens solute carrier family 2... 31 6.8
BC018050-1|AAH18050.1| 440|Homo sapiens oligodendrocyte myelin ... 31 6.8
AK222663-1|BAD96383.1| 440|Homo sapiens oligodendrocyte myelin ... 31 6.8
AC002467-3|AAB88772.1| 327|Homo sapiens unknown protein. 31 6.8
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 30 9.0
AL162458-1|CAH74052.1| 579|Homo sapiens nuclear receptor coacti... 30 9.0
AL035662-2|CAI42972.1| 579|Homo sapiens nuclear receptor coacti... 30 9.0
AL035662-1|CAI42971.1| 104|Homo sapiens nuclear receptor coacti... 30 9.0
AF470686-1|AAO33457.1| 579|Homo sapiens estrogen receptor coact... 30 9.0
AF230533-1|AAG36793.1| 621|Homo sapiens nuclear receptor coacti... 30 9.0
AB046857-1|BAB13463.1| 479|Homo sapiens KIAA1637 protein protein. 30 9.0
>BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.73
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -1
Query: 711 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 628
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57kDa
protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.73
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -1
Query: 711 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 628
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing
protein 8 protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.73
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -1
Query: 711 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 628
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.73
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -1
Query: 711 NIPFIVSKSTAPSHNIGVNIQQVLNGLK 628
++PF+ KST+PSH + N+Q VL+ +K
Sbjct: 288 DMPFVAGKSTSPSHAVVANVQLVLHLMK 315
>BC038294-1|AAH38294.1| 303|Homo sapiens C10orf46 protein protein.
Length = 303
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 276 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 106
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 150 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 201
>AY743663-1|AAU89709.1| 306|Homo sapiens cullin protein.
Length = 306
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 276 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 106
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 150 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 201
>AL139407-1|CAH73727.1| 246|Homo sapiens chromosome 10 open reading
frame 46 protein.
Length = 246
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 276 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 106
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 27 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 78
>AK097728-1|BAC05153.1| 246|Homo sapiens protein ( Homo sapiens
cDNA FLJ40409 fis, clone TESTI2037723. ).
Length = 246
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 276 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 106
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 27 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 78
>AJ544771-1|CAD67614.1| 369|Homo sapiens hypothetical protein
protein.
Length = 369
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -1
Query: 276 QSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELSKELASREEHIRKVVKEFKAS 106
QS +Y + YE I C+ + Q H EQ +L K++ + H+ +V KE +AS
Sbjct: 150 QSPGDYIPI--SYEQIYSCVYKCVCQQHSEQMYSDLIKKITN---HLERVSKELQAS 201
>X57436-1|CAA40684.1| 440|Homo sapiens oligodentrocyte-myelin
glycoprotein protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 170 YLKSWLLEKNTFERSSRSSKRPGTLSSRSGRPRPLQKXGYRHSTFKLXRRRSSTEL 3
+L+ ++ + S++SS P TLS SG P + + +T L R ++T +
Sbjct: 356 HLQDGMVTNTSLTSSTKSSPTPMTLSITSGMPNNFSEMPQQSTTLNLWREETTTNV 411
>X51694-1|CAA35991.1| 433|Homo sapiens oligodendrocyte-myelin
glycoprotein protein.
Length = 433
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 170 YLKSWLLEKNTFERSSRSSKRPGTLSSRSGRPRPLQKXGYRHSTFKLXRRRSSTEL 3
+L+ ++ + S++SS P TLS SG P + + +T L R ++T +
Sbjct: 349 HLQDGMVTNTSLTSSTKSSPTPMTLSITSGMPNNFSEMPQQSTTLNLWREETTTNV 404
>M63623-1|AAA59970.1| 440|Homo sapiens oligodendrocyte-myelin
glycoprotein protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 170 YLKSWLLEKNTFERSSRSSKRPGTLSSRSGRPRPLQKXGYRHSTFKLXRRRSSTEL 3
+L+ ++ + S++SS P TLS SG P + + +T L R ++T +
Sbjct: 356 HLQDGMVTNTSLTSSTKSSPTPMTLSITSGMPNNFSEMPQQSTTLNLWREETTTNV 411
>L02785-1|AAA58443.1| 764|Homo sapiens DRA protein.
Length = 764
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 401 LGTIPSPSRYKFKSLLYDMYL*EGRRNIRCPSLITF 508
L I + YK K YDMY EG + RCPS I F
Sbjct: 511 LANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYF 546
>BC025671-1|AAH25671.1| 764|Homo sapiens solute carrier family 26,
member 3 protein.
Length = 764
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 401 LGTIPSPSRYKFKSLLYDMYL*EGRRNIRCPSLITF 508
L I + YK K YDMY EG + RCPS I F
Sbjct: 511 LANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYF 546
>BC018050-1|AAH18050.1| 440|Homo sapiens oligodendrocyte myelin
glycoprotein protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 170 YLKSWLLEKNTFERSSRSSKRPGTLSSRSGRPRPLQKXGYRHSTFKLXRRRSSTEL 3
+L+ ++ + S++SS P TLS SG P + + +T L R ++T +
Sbjct: 356 HLQDGMVTNTSLTSSTKSSPTPMTLSITSGMPNNFSEMPQQSTTLNLWREETTTNV 411
>AK222663-1|BAD96383.1| 440|Homo sapiens oligodendrocyte myelin
glycoprotein variant protein.
Length = 440
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -2
Query: 170 YLKSWLLEKNTFERSSRSSKRPGTLSSRSGRPRPLQKXGYRHSTFKLXRRRSSTEL 3
+L+ ++ + S++SS P TLS SG P + + +T L R ++T +
Sbjct: 356 HLQDGMVTNTSLTSSTKSSPTPMTLSITSGMPNNFSEMPQQSTTLNLWREETTTNV 411
>AC002467-3|AAB88772.1| 327|Homo sapiens unknown protein.
Length = 327
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 401 LGTIPSPSRYKFKSLLYDMYL*EGRRNIRCPSLITF 508
L I + YK K YDMY EG + RCPS I F
Sbjct: 74 LANIGRTNIYKNKKDYYDMYEPEGVKIFRCPSPIYF 109
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/106 (21%), Positives = 46/106 (43%)
Frame = -1
Query: 345 LTADRDDFDGATSKGRGGSQEAKQSLAEYASLYREYEHIEKCIKEGPYQPHLEQRKEELS 166
L +R+D G G + Q + +L E + + +K + H +Q +E L
Sbjct: 542 LEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQDEVTQLTENVKNQS-ESH-KQAQENLH 599
Query: 165 KELASREEHIRKVVKEFKASGDSEQPLRASASTTEXRVQALNIQIK 28
++ ++ H+R + S L + + ++ +V L+IQIK
Sbjct: 600 DQVQEQKAHLRAAQDRVLSLETSVNELNSQLNESKEKVSQLDIQIK 645
>AL162458-1|CAH74052.1| 579|Homo sapiens nuclear receptor
coactivator 5 protein.
Length = 579
Score = 30.3 bits (65), Expect = 9.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 210 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 76
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 156 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 201
>AL035662-2|CAI42972.1| 579|Homo sapiens nuclear receptor
coactivator 5 protein.
Length = 579
Score = 30.3 bits (65), Expect = 9.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 210 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 76
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 156 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 201
>AL035662-1|CAI42971.1| 104|Homo sapiens nuclear receptor
coactivator 5 protein.
Length = 104
Score = 30.3 bits (65), Expect = 9.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 210 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 76
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 51 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 96
>AF470686-1|AAO33457.1| 579|Homo sapiens estrogen receptor
coactivator protein.
Length = 579
Score = 30.3 bits (65), Expect = 9.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 210 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 76
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 156 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 201
>AF230533-1|AAG36793.1| 621|Homo sapiens nuclear receptor
coactivator CIA protein.
Length = 621
Score = 30.3 bits (65), Expect = 9.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 210 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 76
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 198 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 243
>AB046857-1|BAB13463.1| 479|Homo sapiens KIAA1637 protein protein.
Length = 479
Score = 30.3 bits (65), Expect = 9.0
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 210 GPYQPHLEQR-KEELSKELASREEHIRKVVKEFKASGDSEQPLRAS 76
GP P + R KE L +E REE R+ +E + D+E+P+ S
Sbjct: 56 GPPGPESQSRAKERLKREERRREELYRQYFEEIQRRFDAERPVDCS 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,882,767
Number of Sequences: 237096
Number of extensions: 2842191
Number of successful extensions: 9252
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9252
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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