Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10h06
         (825 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC044227-1|AAH44227.1|  257|Homo sapiens PARK2 co-regulated prot...    87   6e-17
BC030642-1|AAH30642.1|  257|Homo sapiens PARK2 co-regulated prot...    87   6e-17
AL354942-1|CAI16054.1|  257|Homo sapiens RP3-495O10.2 protein.         87   6e-17
AL137182-1|CAI19951.1|  257|Homo sapiens CpG island.   protein.        87   6e-17
AL031121-1|CAI21557.1|  257|Homo sapiens RP3-495O10.2 protein.         87   6e-17
AF546872-1|AAN37911.1|  257|Homo sapiens PACRG protein.                87   6e-17
AK057286-1|BAB71410.1|  296|Homo sapiens protein ( Homo sapiens ...    82   3e-15

>BC044227-1|AAH44227.1|  257|Homo sapiens PARK2 co-regulated
           protein.
          Length = 257

 Score = 87.4 bits (207), Expect = 6e-17
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = -3

Query: 820 FKDRNRNXGSGIDHTTTRGENVGDLIEDTLQILERYGGPDAFINIKYMIPTYESCVLN 647
           FK+ N N G GID++  + EN+GDLI++TL+  ERYGG +AFINIKY++PTYESC+LN
Sbjct: 200 FKNMNVNSGDGIDYSQQKRENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN 257


>BC030642-1|AAH30642.1|  257|Homo sapiens PARK2 co-regulated
           protein.
          Length = 257

 Score = 87.4 bits (207), Expect = 6e-17
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = -3

Query: 820 FKDRNRNXGSGIDHTTTRGENVGDLIEDTLQILERYGGPDAFINIKYMIPTYESCVLN 647
           FK+ N N G GID++  + EN+GDLI++TL+  ERYGG +AFINIKY++PTYESC+LN
Sbjct: 200 FKNMNVNSGDGIDYSQQKRENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN 257


>AL354942-1|CAI16054.1|  257|Homo sapiens RP3-495O10.2 protein.
          Length = 257

 Score = 87.4 bits (207), Expect = 6e-17
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = -3

Query: 820 FKDRNRNXGSGIDHTTTRGENVGDLIEDTLQILERYGGPDAFINIKYMIPTYESCVLN 647
           FK+ N N G GID++  + EN+GDLI++TL+  ERYGG +AFINIKY++PTYESC+LN
Sbjct: 200 FKNMNVNSGDGIDYSQQKRENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN 257


>AL137182-1|CAI19951.1|  257|Homo sapiens CpG island.   protein.
          Length = 257

 Score = 87.4 bits (207), Expect = 6e-17
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = -3

Query: 820 FKDRNRNXGSGIDHTTTRGENVGDLIEDTLQILERYGGPDAFINIKYMIPTYESCVLN 647
           FK+ N N G GID++  + EN+GDLI++TL+  ERYGG +AFINIKY++PTYESC+LN
Sbjct: 200 FKNMNVNSGDGIDYSQQKRENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN 257


>AL031121-1|CAI21557.1|  257|Homo sapiens RP3-495O10.2 protein.
          Length = 257

 Score = 87.4 bits (207), Expect = 6e-17
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = -3

Query: 820 FKDRNRNXGSGIDHTTTRGENVGDLIEDTLQILERYGGPDAFINIKYMIPTYESCVLN 647
           FK+ N N G GID++  + EN+GDLI++TL+  ERYGG +AFINIKY++PTYESC+LN
Sbjct: 200 FKNMNVNSGDGIDYSQQKRENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN 257


>AF546872-1|AAN37911.1|  257|Homo sapiens PACRG protein.
          Length = 257

 Score = 87.4 bits (207), Expect = 6e-17
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = -3

Query: 820 FKDRNRNXGSGIDHTTTRGENVGDLIEDTLQILERYGGPDAFINIKYMIPTYESCVLN 647
           FK+ N N G GID++  + EN+GDLI++TL+  ERYGG +AFINIKY++PTYESC+LN
Sbjct: 200 FKNMNVNSGDGIDYSQQKRENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN 257


>AK057286-1|BAB71410.1|  296|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32724 fis, clone TESTI2000951. ).
          Length = 296

 Score = 81.8 bits (193), Expect = 3e-15
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = -3

Query: 802 NXGSGIDHTTTRGENVGDLIEDTLQILERYGGPDAFINIKYMIPTYESCVLN 647
           N G GID++  + EN+GDLI++TL+  ERYGG +AFINIKY++PTYESC+LN
Sbjct: 245 NSGDGIDYSQQKRENIGDLIQETLEAFERYGGENAFINIKYVVPTYESCLLN 296


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,733,808
Number of Sequences: 237096
Number of extensions: 1601379
Number of successful extensions: 2395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2395
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)