Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10h03
(822 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p pro... 79 5e-15
AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA... 79 5e-15
BT022350-1|AAY54766.1| 176|Drosophila melanogaster IP04476p pro... 53 4e-07
BT022266-1|AAY54682.1| 176|Drosophila melanogaster IP04776p pro... 53 4e-07
AE014297-4692|AAN14264.2| 176|Drosophila melanogaster CG31007-P... 53 4e-07
BT016161-1|AAV37046.1| 114|Drosophila melanogaster AT10055p pro... 51 2e-06
AE014297-4691|AAN14263.1| 114|Drosophila melanogaster CG31008-P... 50 4e-06
AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown prot... 31 1.9
AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA... 31 1.9
>AY128487-1|AAM75080.1| 170|Drosophila melanogaster RE73921p
protein.
Length = 170
Score = 79.4 bits (187), Expect = 5e-15
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Frame = -3
Query: 526 LTGMFSGGGSSEXXXXXXXXXXXQTYNQY---QGQP--AQGPCAWEIKQFLECAQQQHDL 362
LT +FSG G E Y Q QP QG CAWE+KQF++CAQ Q DL
Sbjct: 91 LTSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADL 150
Query: 361 SLCDGFNEALRQCKVNNHI 305
+LC+GFNEALRQCK ++H+
Sbjct: 151 TLCEGFNEALRQCKQSHHL 169
>AE014298-2527|AAF48701.1| 170|Drosophila melanogaster CG5010-PA
protein.
Length = 170
Score = 79.4 bits (187), Expect = 5e-15
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Frame = -3
Query: 526 LTGMFSGGGSSEXXXXXXXXXXXQTYNQY---QGQP--AQGPCAWEIKQFLECAQQQHDL 362
LT +FSG G E Y Q QP QG CAWE+KQF++CAQ Q DL
Sbjct: 91 LTSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADL 150
Query: 361 SLCDGFNEALRQCKVNNHI 305
+LC+GFNEALRQCK ++H+
Sbjct: 151 TLCEGFNEALRQCKQSHHL 169
>BT022350-1|AAY54766.1| 176|Drosophila melanogaster IP04476p
protein.
Length = 176
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = -3
Query: 526 LTGMFSGGGSSEXXXXXXXXXXXQTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHD 365
LTGMF G G + + Q P GPCA+E++QFL+C + D
Sbjct: 97 LTGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSD 156
Query: 364 LSLCDGFNEALRQCK 320
LS+C FNEA++QC+
Sbjct: 157 LSVCKEFNEAMQQCR 171
>BT022266-1|AAY54682.1| 176|Drosophila melanogaster IP04776p
protein.
Length = 176
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = -3
Query: 526 LTGMFSGGGSSEXXXXXXXXXXXQTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHD 365
LTGMF G G + + Q P GPCA+E++QFL+C + D
Sbjct: 97 LTGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSD 156
Query: 364 LSLCDGFNEALRQCK 320
LS+C FNEA++QC+
Sbjct: 157 LSVCKEFNEAMQQCR 171
>AE014297-4692|AAN14264.2| 176|Drosophila melanogaster CG31007-PA
protein.
Length = 176
Score = 53.2 bits (122), Expect = 4e-07
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = -3
Query: 526 LTGMFSGGGSSEXXXXXXXXXXXQTYNQYQGQPA-----QGPCAWEIKQFLECAQ-QQHD 365
LTGMF G G + + Q P GPCA+E++QFL+C + D
Sbjct: 97 LTGMFQGRGQAAPAKEQPQQEGSLAASASQSVPKPQLVEDGPCAFELRQFLKCTEDNSSD 156
Query: 364 LSLCDGFNEALRQCK 320
LS+C FNEA++QC+
Sbjct: 157 LSVCKEFNEAMQQCR 171
>BT016161-1|AAV37046.1| 114|Drosophila melanogaster AT10055p
protein.
Length = 114
Score = 51.2 bits (117), Expect = 2e-06
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = -3
Query: 424 QGPCAWEIKQFLECAQQQHDLSLCDGFNEALRQC 323
+GPCA E+KQFL+C + DLS+C FN+A+R+C
Sbjct: 75 EGPCAKEMKQFLKCTEDNDDLSVCKEFNDAVRRC 108
>AE014297-4691|AAN14263.1| 114|Drosophila melanogaster CG31008-PA
protein.
Length = 114
Score = 50.0 bits (114), Expect = 4e-06
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = -3
Query: 424 QGPCAWEIKQFLECAQQQHDLSLCDGFNEALRQC 323
+GPCA E+K+FL+C + DLS+C FN+A+R+C
Sbjct: 75 EGPCAKEMKEFLKCTEDNDDLSVCKEFNDAVRRC 108
>AF132196-1|AAD34784.1| 1181|Drosophila melanogaster unknown
protein.
Length = 1181
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -2
Query: 752 KC*LNHASTRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 600
KC L A +S+ + SAS +S + + + + PG SSS+SA L+
Sbjct: 785 KCLLQDAMATSLSQQALSASTQSLTSSSPAPDATAAAAPGTSSSSSSAILS 835
>AE014297-3830|AAF56487.1| 1181|Drosophila melanogaster CG4719-PA
protein.
Length = 1181
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -2
Query: 752 KC*LNHASTRKISKPSTSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 600
KC L A +S+ + SAS +S + + + + PG SSS+SA L+
Sbjct: 785 KCLLQDAMATSLSQQALSASTQSLTSSSPAPDATAAAAPGTSSSSSSAILS 835
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,714,846
Number of Sequences: 53049
Number of extensions: 613713
Number of successful extensions: 1829
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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