Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10h02
(832 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB... 36 0.068
AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA... 35 0.16
AY061165-1|AAL28713.1| 493|Drosophila melanogaster LD13176p pro... 32 0.84
AE014296-2650|AAF49528.3| 493|Drosophila melanogaster CG5151-PA... 32 0.84
AE014296-2649|AAS64987.1| 695|Drosophila melanogaster CG5151-PB... 32 0.84
AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p pro... 31 1.9
AY061538-1|AAL29086.1| 196|Drosophila melanogaster LP02106p pro... 31 1.9
AF020349-1|AAC15518.1| 756|Drosophila melanogaster CROL GAMMA p... 31 1.9
AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA pr... 31 1.9
AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA p... 31 1.9
AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-P... 31 1.9
AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-P... 31 1.9
AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-P... 31 1.9
AE014134-2095|AAN10784.1| 756|Drosophila melanogaster CG14938-P... 31 1.9
U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein. 29 7.8
L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets sho... 29 7.8
L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets lon... 29 7.8
L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets lon... 29 7.8
L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets sho... 29 7.8
BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p pro... 29 7.8
AF145677-1|AAD38652.1| 1689|Drosophila melanogaster BcDNA.LD2258... 29 7.8
AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-P... 29 7.8
AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-P... 29 7.8
AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC... 29 7.8
AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA... 29 7.8
>AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB
protein.
Length = 1003
Score = 35.9 bits (79), Expect = 0.068
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 497 HVAWHEQRQVKQHSNQ-RPPQHRPHEHSRPVLTPPRDIRI 613
HV +Q+Q QH Q PPQHRP E S P RD+++
Sbjct: 278 HVQRRQQQQHHQHLRQPSPPQHRPLERSWPPRAVGRDLKL 317
>AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA
protein.
Length = 1669
Score = 34.7 bits (76), Expect = 0.16
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 509 HEQRQVKQH---SNQRPPQHRPHEHSRPVLTPPRDIRIAAP 622
H Q+Q +QH Q+PPQ +P +H + + PP + I+ P
Sbjct: 87 HPQQQPQQHPQQQTQQPPQLQPQQHPQAQIQPPIPVPISTP 127
>AY061165-1|AAL28713.1| 493|Drosophila melanogaster LD13176p
protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.84
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 30 LRXLPLEAPPAGM*SNSTAFLL*PHLNIFQATSSGLAP-GCSAHASSTLVTSRPAGLAAS 206
+R +P + G +S+++ L QA SS P G S ASS+ S+P +
Sbjct: 243 VRDVPEQISAGGCGVSSSSY----RLTTLQAASSTYTPAGVSVSASSSSSKSKPNAITKF 298
Query: 207 FPSIAALSSFPSFPI--ILQLSRTQYTCFLSAASSISSPFIMDSNSLGST 350
F I++ S PS + + S S+ASS++S + ++S S+
Sbjct: 299 FSRISSPKSPPSCTMTSVATASPASSVSMSSSASSLASSACVSTSSSASS 348
>AE014296-2650|AAF49528.3| 493|Drosophila melanogaster CG5151-PA,
isoform A protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.84
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 30 LRXLPLEAPPAGM*SNSTAFLL*PHLNIFQATSSGLAP-GCSAHASSTLVTSRPAGLAAS 206
+R +P + G +S+++ L QA SS P G S ASS+ S+P +
Sbjct: 243 VRDVPEQISAGGCGVSSSSY----RLTTLQAASSTYTPAGVSVSASSSSSKSKPNAITKF 298
Query: 207 FPSIAALSSFPSFPI--ILQLSRTQYTCFLSAASSISSPFIMDSNSLGST 350
F I++ S PS + + S S+ASS++S + ++S S+
Sbjct: 299 FSRISSPKSPPSCTMTSVATASPASSVSMSSSASSLASSACVSTSSSASS 348
>AE014296-2649|AAS64987.1| 695|Drosophila melanogaster CG5151-PB,
isoform B protein.
Length = 695
Score = 32.3 bits (70), Expect = 0.84
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 30 LRXLPLEAPPAGM*SNSTAFLL*PHLNIFQATSSGLAP-GCSAHASSTLVTSRPAGLAAS 206
+R +P + G +S+++ L QA SS P G S ASS+ S+P +
Sbjct: 445 VRDVPEQISAGGCGVSSSSY----RLTTLQAASSTYTPAGVSVSASSSSSKSKPNAITKF 500
Query: 207 FPSIAALSSFPSFPI--ILQLSRTQYTCFLSAASSISSPFIMDSNSLGST 350
F I++ S PS + + S S+ASS++S + ++S S+
Sbjct: 501 FSRISSPKSPPSCTMTSVATASPASSVSMSSSASSLASSACVSTSSSASS 550
>AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p
protein.
Length = 878
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 809 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 868
Query: 677 SSV 685
++V
Sbjct: 869 ANV 871
>AY061538-1|AAL29086.1| 196|Drosophila melanogaster LP02106p
protein.
Length = 196
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 127 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 186
Query: 677 SSV 685
++V
Sbjct: 187 ANV 189
>AF020349-1|AAC15518.1| 756|Drosophila melanogaster CROL GAMMA
protein.
Length = 756
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 687 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 746
Query: 677 SSV 685
++V
Sbjct: 747 ANV 749
>AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA
protein.
Length = 891
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 822 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 881
Query: 677 SSV 685
++V
Sbjct: 882 ANV 884
>AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA
protein.
Length = 962
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 893 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 952
Query: 677 SSV 685
++V
Sbjct: 953 ANV 955
>AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-PA,
isoform A protein.
Length = 962
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 893 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 952
Query: 677 SSV 685
++V
Sbjct: 953 ANV 955
>AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-PB,
isoform B protein.
Length = 891
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 822 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 881
Query: 677 SSV 685
++V
Sbjct: 882 ANV 884
>AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-PD,
isoform D protein.
Length = 878
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 809 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 868
Query: 677 SSV 685
++V
Sbjct: 869 ANV 871
>AE014134-2095|AAN10784.1| 756|Drosophila melanogaster CG14938-PC,
isoform C protein.
Length = 756
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 HEQRQVKQHSNQRPPQ-HRPHEHSRPVLTPPRDIRIAAPTTVL---RRTVDRQLDVEHLP 676
H Q+Q +QH Q+ Q H+ + P PP+ + P ++ + ++HLP
Sbjct: 687 HRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLP 746
Query: 677 SSV 685
++V
Sbjct: 747 ANV 749
>U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.
Length = 1262
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 527 KQHSNQRPPQHRPH--EHSRPVLTPPRDIRIAAPTTVLRRTVDRQLD 661
++ ++PPQ +P H+ P PPR + T L TV QLD
Sbjct: 94 EEDEGKKPPQSQPQLQSHAHPHPPPPRPLVPPQSTQDLISTVSSQLD 140
>L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 346
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 346
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 346
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 346
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p
protein.
Length = 1262
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 527 KQHSNQRPPQHRPH--EHSRPVLTPPRDIRIAAPTTVLRRTVDRQLD 661
++ ++PPQ +P H+ P PPR + T L TV QLD
Sbjct: 94 EEDEGKKPPQSQPQLQSHAHPHPPPPRPLVPPQSTQDLISTVSSQLD 140
>AF145677-1|AAD38652.1| 1689|Drosophila melanogaster BcDNA.LD22582
protein.
Length = 1689
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 346
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 102 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 133
>AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-PB,
isoform B protein.
Length = 1260
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 527 KQHSNQRPPQHRPH--EHSRPVLTPPRDIRIAAPTTVLRRTVDRQLD 661
++ ++PPQ +P H+ P PPR + T L TV QLD
Sbjct: 94 EEDEGKKPPQSQPQLQSHAHPHPPPPRPLVPPQSTQDLISTVSSQLD 140
>AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-PA,
isoform A protein.
Length = 1260
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 527 KQHSNQRPPQHRPH--EHSRPVLTPPRDIRIAAPTTVLRRTVDRQLD 661
++ ++PPQ +P H+ P PPR + T L TV QLD
Sbjct: 94 EEDEGKKPPQSQPQLQSHAHPHPPPPRPLVPPQSTQDLISTVSSQLD 140
>AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC,
isoform C protein.
Length = 2711
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 346
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA,
isoform A protein.
Length = 2778
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 248 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 346
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,621,081
Number of Sequences: 53049
Number of extensions: 646386
Number of successful extensions: 3994
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3910
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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