Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10g24
         (791 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC129999-1|AAI30000.1|  216|Homo sapiens LOC730112 protein protein.    64   6e-10
BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17 p...    63   1e-09
BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17 p...    63   1e-09
AK097419-1|BAC05044.1|  271|Homo sapiens protein ( Homo sapiens ...    63   1e-09
U50330-1|AAA93462.1|  986|Homo sapiens procollagen C-proteinase ...    32   2.7  
BC142953-1|AAI42954.1|  986|Homo sapiens bone morphogenetic prot...    32   2.7  

>BC129999-1|AAI30000.1|  216|Homo sapiens LOC730112 protein protein.
          Length = 216

 Score = 64.1 bits (149), Expect = 6e-10
 Identities = 42/123 (34%), Positives = 58/123 (47%)
 Frame = -3

Query: 627 PHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDFQIYRPAQNE 448
           PHYIPGYTGHCP  ++ +G TYG  T ++L  P       +    RT     I  P   E
Sbjct: 16  PHYIPGYTGHCPLLRFSVGQTYGQVTGQLLRGPPGLAWPPV---HRTLLP-PIRPPRSPE 71

Query: 447 IDIVNARFRNGDPVYKHPMIPGYEGFSGHVPYGFQRFGESSKKLTNSALCDFSSNYRRRQ 268
           +   +   R G       MIPGY GF   VP     F ++  ++   AL DF+  + ++ 
Sbjct: 72  VPRESLPVRRGQERLSSSMIPGYTGF---VPRAQFIFAKNCSQVWAEALSDFTHLHEKQG 128

Query: 267 STE 259
           S E
Sbjct: 129 SEE 131


>BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = -3

Query: 630 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 475
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS  +   F
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64



 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 210 PTEIYHKHVGMLPNYAGHVPGCVFRFGKTYGNDTRDA--KRWLRGDFT 73
           P+   +   G++P Y G +P     +  T+GN TR A  K W + + T
Sbjct: 269 PSNHIYSSQGLIPFYMGFIPAMQDNYALTFGNSTRRAYWKEWAKRNHT 316


>BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = -3

Query: 630 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 475
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS  +   F
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64



 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 210 PTEIYHKHVGMLPNYAGHVPGCVFRFGKTYGNDTRDA--KRWLRGDFT 73
           P+   +   G++P Y G +P     +  T+GN TR A  K W + + T
Sbjct: 269 PSNHIYSSQGLIPFYMGFIPAMQDNYALTFGNSTRRAYWKEWAKRNHT 316


>AK097419-1|BAC05044.1|  271|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40100 fis, clone TESTI2004675. ).
          Length = 271

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = -3

Query: 630 QPHYIPGYTGHCPEYKYRIGDTYGSTTHKILLDPSVQHSERLVLSDRTADDF 475
           +PHY+PGY G  P+ +Y++G+TYG TT ++L DPSVQ S   VLS  +   F
Sbjct: 13  EPHYVPGYAGFFPQLRYQVGNTYGRTTGQLLTDPSVQKSPCSVLSPMSKPKF 64


>U50330-1|AAA93462.1|  986|Homo sapiens procollagen C-proteinase
           protein.
          Length = 986

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = +3

Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 557
           D CK D  +  VRS   + S L G+  GS +P   +  +  N  R + +    +S     
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697

Query: 558 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 638
           +H +   D C++DN  C Q+  N  G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCVNTFGSY 725


>BC142953-1|AAI42954.1|  986|Homo sapiens bone morphogenetic protein
           1 protein.
          Length = 986

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
 Frame = +3

Query: 396 DACKRDRHYGNVRSRCLSRSVLDGR-SGSHRPFYRIAPASLNAARSDREGSCVLS----- 557
           D CK D  +  VRS   + S L G+  GS +P   +  +  N  R + +    +S     
Sbjct: 642 DVCKYD--FVEVRSGLTADSKLHGKFCGSEKP--EVITSQYNNMRVEFKSDNTVSKKGFK 697

Query: 558 SHTYRRSDTCTRDNDPCTQE-YNAVGRY 638
           +H +   D C++DN  C Q+  N  G Y
Sbjct: 698 AHFFSDKDECSKDNGGCQQDCINTFGSY 725


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,855,989
Number of Sequences: 237096
Number of extensions: 2591001
Number of successful extensions: 6158
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6149
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)