Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10g24
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    27   0.20 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.9  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -1

Query: 176 CPTTQVTCQAASSDSEKPTATTRETLSVGSEETSHLRR 63
           C T  VTC   S ++E P++T++++  V S + S + R
Sbjct: 261 CVTNSVTCDRPSDEAE-PSSTSKKSGIVRSHQQSCINR 297


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 672 FLKFTMALDLVSIAQPHYIPGYTGHCPEYKY 580
           ++K    L + S A+   +PG    CP YKY
Sbjct: 294 YVKIVYYLGIPSEARELQLPGCEVLCPLYKY 324


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 672 FLKFTMALDLVSIAQPHYIPGYTGHCPEYKY 580
           ++K    L + S A+   +PG    CP YKY
Sbjct: 309 YVKIVYYLGIPSEARELQLPGCEVLCPLYKY 339


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 619 YSWVHGSLSRVQVSDRRYVWLD 554
           + W   S+ R++  D  YVW D
Sbjct: 129 HPWFKKSVQRIKPYDEYYVWRD 150


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 408 VYKHPMIPGYEGFSGHVP 355
           +YKH M+P  E FS + P
Sbjct: 85  IYKHGMLPRGELFSLYYP 102


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 408 VYKHPMIPGYEGFSGHVP 355
           +YKH M+P  E FS + P
Sbjct: 85  IYKHGMLPRGELFSLYYP 102


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 330 SSKKLTNSALCDFSSNYRRRQSTEWAPVN 244
           +S ++ N+   +  SNYR  +  +  P N
Sbjct: 380 ASSRMENNLRGETQSNYREMEKRQSVPAN 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,460
Number of Sequences: 438
Number of extensions: 5725
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)