Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10g17
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025787-1|AAH25787.1| 389|Homo sapiens alkB, alkylation repair... 71 5e-12
AC008044-1|AAF01478.1| 389|Homo sapiens ABH protein. 71 5e-12
BC015024-1|AAH15024.1| 380|Homo sapiens ALKBH1 protein protein. 71 6e-12
X91992-1|CAA63047.1| 299|Homo sapiens alkB homolog protein prot... 68 3e-11
U83867-1|AAB41498.1| 2477|Homo sapiens alpha II spectrin protein. 32 2.0
J05243-1|AAA51790.1| 2472|Homo sapiens SPTAN1 protein. 32 2.0
BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein. 32 2.0
AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha, non-er... 32 2.0
AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha, non-er... 32 2.0
AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha, non-er... 32 2.0
AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectr... 32 2.0
X86901-1|CAA60503.1| 375|Homo sapiens alpha-spectrin protein. 31 3.5
M19725-1|AAA59904.1| 475|Homo sapiens SPTAN1 protein. 31 3.5
BX537792-1|CAD97844.1| 632|Homo sapiens hypothetical protein pr... 31 3.5
BC130387-1|AAI30388.1| 632|Homo sapiens family with sequence si... 31 3.5
AK092412-1|BAC03880.1| 632|Homo sapiens protein ( Homo sapiens ... 31 3.5
>BC025787-1|AAH25787.1| 389|Homo sapiens alkB, alkylation repair
homolog 1 (E. coli) protein.
Length = 389
Score = 70.9 bits (166), Expect = 5e-12
Identities = 42/113 (37%), Positives = 65/113 (57%)
Frame = +1
Query: 43 GQSAIFLIGGREKSIEPSAILLXSGDIVVMSKEARLCYHAVPKILPEYHQPWNSDLSELD 222
GQSAIFL+GG ++ P+A+ + SGDI++MS +RL HAVP++LP P L
Sbjct: 249 GQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLLNHAVPRVLP---NPEGEGLPHCL 305
Query: 223 FNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEKQ 381
+P+ + P+ ++M E + W +Y+K +R+N+ VRQVL Q
Sbjct: 306 EAPLPAVL----PR---DSMVEPCSMEDWQVCASYLKTARVNMTVRQVLATDQ 351
>AC008044-1|AAF01478.1| 389|Homo sapiens ABH protein.
Length = 389
Score = 70.9 bits (166), Expect = 5e-12
Identities = 42/113 (37%), Positives = 65/113 (57%)
Frame = +1
Query: 43 GQSAIFLIGGREKSIEPSAILLXSGDIVVMSKEARLCYHAVPKILPEYHQPWNSDLSELD 222
GQSAIFL+GG ++ P+A+ + SGDI++MS +RL HAVP++LP P L
Sbjct: 249 GQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLLNHAVPRVLP---NPEGEGLPHCL 305
Query: 223 FNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEKQ 381
+P+ + P+ ++M E + W +Y+K +R+N+ VRQVL Q
Sbjct: 306 EAPLPAVL----PR---DSMVEPCSMEDWQVCASYLKTARVNMTVRQVLATDQ 351
>BC015024-1|AAH15024.1| 380|Homo sapiens ALKBH1 protein protein.
Length = 380
Score = 70.5 bits (165), Expect = 6e-12
Identities = 42/113 (37%), Positives = 65/113 (57%)
Frame = +1
Query: 43 GQSAIFLIGGREKSIEPSAILLXSGDIVVMSKEARLCYHAVPKILPEYHQPWNSDLSELD 222
GQSAIFL+GG ++ P+A+ + SGDI++MS +RL HAVP++LP P L
Sbjct: 240 GQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLLNHAVPRVLP---NPEGEGLPHCL 296
Query: 223 FNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEKQ 381
+P+ + P+ ++M E + W +Y+K +R+N+ VRQVL Q
Sbjct: 297 EAPLPAVL----PR---DSMVEPCSLEDWQVCASYLKTARVNMTVRQVLATDQ 342
>X91992-1|CAA63047.1| 299|Homo sapiens alkB homolog protein
protein.
Length = 299
Score = 68.1 bits (159), Expect = 3e-11
Identities = 41/113 (36%), Positives = 63/113 (55%)
Frame = +1
Query: 43 GQSAIFLIGGREKSIEPSAILLXSGDIVVMSKEARLCYHAVPKILPEYHQPWNSDLSELD 222
GQSAIFL+GG ++ P + + SGDI++MS +RL HAVP++LP P L
Sbjct: 174 GQSAIFLLGGLQRDEAPPPMFMHSGDIMIMSGFSRLLNHAVPRVLP---NPEGEGLPHCL 230
Query: 223 FNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEKQ 381
+P+ + P+ ++M E + W +Y+K +R+N+ VRQVL Q
Sbjct: 231 EAPLPAVL----PR---DSMVEPCSMEDWQVCASYLKTARVNMTVRQVLATDQ 276
>U83867-1|AAB41498.1| 2477|Homo sapiens alpha II spectrin protein.
Length = 2477
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 2132 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 2186
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 2187 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 2241
>J05243-1|AAA51790.1| 2472|Homo sapiens SPTAN1 protein.
Length = 2472
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 2127 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 2181
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 2182 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 2236
>BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein.
Length = 2452
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 2107 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 2161
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 2162 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 2216
>AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2472
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 2127 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 2181
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 2182 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 2236
>AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2477
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 2132 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 2186
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 2187 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 2241
>AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) variant protein.
Length = 2506
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 2161 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 2215
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 2216 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 2270
>AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectrin
alpha protein.
Length = 2452
Score = 32.3 bits (70), Expect = 2.0
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 2107 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 2161
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 2162 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 2216
>X86901-1|CAA60503.1| 375|Homo sapiens alpha-spectrin protein.
Length = 375
Score = 31.5 bits (68), Expect = 3.5
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 69 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVRSNPYTWFTMEALEET-----WRN 123
Query: 316 FENYIKESRININVRQVLNEKQISLADEFFS*NKTVFYSVVHSYSKNIILKSLCVLQ 486
+ IKE + + Q E+ L EF + F+ + ++ +L C+++
Sbjct: 124 LQKIIKERELELQKEQRRQEENDKLRQEFAQ-HANAFHQWIQE-TRTYLLDGSCMVE 178
>M19725-1|AAA59904.1| 475|Homo sapiens SPTAN1 protein.
Length = 475
Score = 31.5 bits (68), Expect = 3.5
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Frame = +1
Query: 169 KILPEYHQPWNSDLS--ELDFNKMP-------SFMYISNPKE--TIEAMNENIENDKWSE 315
K L E H + S LS + DFN++ SF SNP T+EA+ E W
Sbjct: 357 KALREAHDAFRSSLSSAQADFNQLAELDRQIKSFRVASNPYTWFTMEALEET-----WRN 411
Query: 316 FENYIKESRININVRQVLNEKQISLADEF 402
+ IKE + + Q E+ L EF
Sbjct: 412 LQKIIKERELELQKEQRRQEENDKLRQEF 440
>BX537792-1|CAD97844.1| 632|Homo sapiens hypothetical protein
protein.
Length = 632
Score = 31.5 bits (68), Expect = 3.5
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 217 LDFNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEK--QISL 390
LDF M SF + NP +I +N+ N++W + KE+ + + VL +K Q+ +
Sbjct: 469 LDFILMDSFEDLENPPTSI----QNVVNNRW--LNSSFKETAVASSCWSVLKQKRQQMKI 522
Query: 391 ADEFFS 408
D FF+
Sbjct: 523 PDGFFA 528
>BC130387-1|AAI30388.1| 632|Homo sapiens family with sequence
similarity 73, member A protein.
Length = 632
Score = 31.5 bits (68), Expect = 3.5
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 217 LDFNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEK--QISL 390
LDF M SF + NP +I +N+ N++W + KE+ + + VL +K Q+ +
Sbjct: 469 LDFILMDSFEDLENPPTSI----QNVVNNRW--LNSSFKETAVASSCWSVLKQKRQQMKI 522
Query: 391 ADEFFS 408
D FF+
Sbjct: 523 PDGFFA 528
>AK092412-1|BAC03880.1| 632|Homo sapiens protein ( Homo sapiens
cDNA FLJ35093 fis, clone PLACE6006137. ).
Length = 632
Score = 31.5 bits (68), Expect = 3.5
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 217 LDFNKMPSFMYISNPKETIEAMNENIENDKWSEFENYIKESRININVRQVLNEK--QISL 390
LDF M SF + NP +I +N+ N++W + KE+ + + VL +K Q+ +
Sbjct: 469 LDFILMDSFEDLENPPTSI----QNVVNNRW--LNSSFKETAVASSCWSVLKQKRQQMKI 522
Query: 391 ADEFFS 408
D FF+
Sbjct: 523 PDGFFA 528
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,086,218
Number of Sequences: 237096
Number of extensions: 1957181
Number of successful extensions: 4048
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4044
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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