Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10g16
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC088361-1|AAH88361.1| 245|Homo sapiens OCIA domain containing ... 94 5e-19
BC003409-1|AAH03409.1| 245|Homo sapiens OCIA domain containing ... 94 5e-19
AK000462-1|BAA91181.1| 245|Homo sapiens protein ( Homo sapiens ... 94 5e-19
AF323665-1|AAG45220.1| 245|Homo sapiens ovarian carcinoma immun... 94 5e-19
AF251296-1|AAG44596.1| 245|Homo sapiens TPA018 protein. 94 5e-19
AF324350-1|AAK12121.1| 187|Homo sapiens ovarian immunoreactive ... 78 4e-14
AY472117-1|AAS47684.1| 154|Homo sapiens ovarian carcinoma immun... 66 1e-10
BC032808-1|AAH32808.1| 99|Homo sapiens OCIA domain containing ... 47 7e-05
CR533471-1|CAG38502.1| 212|Homo sapiens PXMP4 protein. 31 4.8
BC001147-1|AAH01147.1| 212|Homo sapiens PXMP4 protein protein. 31 4.8
AL442124-2|CAH73157.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.8
AL391319-3|CAI39895.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.8
AL138918-2|CAI20434.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.8
AL109940-2|CAI20529.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.8
AL050349-1|CAC14086.1| 212|Homo sapiens peroxisomal membrane pr... 31 4.8
AF072864-1|AAD43195.1| 212|Homo sapiens peroxisomal membrane pr... 31 4.8
AB014737-1|BAB20274.1| 457|Homo sapiens SMAP-2b protein. 31 4.8
>BC088361-1|AAH88361.1| 245|Homo sapiens OCIA domain containing 1
protein.
Length = 245
Score = 94.3 bits (224), Expect = 5e-19
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Frame = -1
Query: 790 TQDEIKALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGY 611
T++E + EC+ ESF+ R P +A +T + G L +P++G PK+ LA ++GY
Sbjct: 28 TEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGY 87
Query: 610 FLGKLSYQQACAEKLMALPGSYIGQILRD---RKNGKIGGTSMPVQTPSMYGATTNDIYS 440
F GKLSY + C EK L S +G+ LR R++ G + S ++ + S
Sbjct: 88 FAGKLSYVKTCQEKFKKLENSPLGEALRSGQARRSSPPGHYYQKSKYDSSVSGQSSFVTS 147
Query: 439 DAGPGSSLDLDTNRPV-FSED------TYRPDN--EGPGPNLEEPIPARPSVSYDDLRRQ 287
A + L P+ FS T D+ +GP PNLEE P R +++Y++LR +
Sbjct: 148 PAADNIEM-LPHYEPIPFSSSMNESAPTGITDHIVQGPDPNLEES-PKRKNITYEELRNK 205
Query: 286 NRGQY---VKERQDP 251
NR Y + ++ DP
Sbjct: 206 NRESYEVSLTQKTDP 220
>BC003409-1|AAH03409.1| 245|Homo sapiens OCIA domain containing 1
protein.
Length = 245
Score = 94.3 bits (224), Expect = 5e-19
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Frame = -1
Query: 790 TQDEIKALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGY 611
T++E + EC+ ESF+ R P +A +T + G L +P++G PK+ LA ++GY
Sbjct: 28 TEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGY 87
Query: 610 FLGKLSYQQACAEKLMALPGSYIGQILRD---RKNGKIGGTSMPVQTPSMYGATTNDIYS 440
F GKLSY + C EK L S +G+ LR R++ G + S ++ + S
Sbjct: 88 FAGKLSYVKTCQEKFKKLENSPLGEALRSGQARRSSPPGHYYQKSKYDSSVSGQSSFVTS 147
Query: 439 DAGPGSSLDLDTNRPV-FSED------TYRPDN--EGPGPNLEEPIPARPSVSYDDLRRQ 287
A + L P+ FS T D+ +GP PNLEE P R +++Y++LR +
Sbjct: 148 PAADNIEM-LPHYEPIPFSSSMNESAPTGITDHIVQGPDPNLEES-PKRKNITYEELRNK 205
Query: 286 NRGQY---VKERQDP 251
NR Y + ++ DP
Sbjct: 206 NRESYEVSLTQKTDP 220
>AK000462-1|BAA91181.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ20455 fis, clone KAT05813. ).
Length = 245
Score = 94.3 bits (224), Expect = 5e-19
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Frame = -1
Query: 790 TQDEIKALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGY 611
T++E + EC+ ESF+ R P +A +T + G L +P++G PK+ LA ++GY
Sbjct: 28 TEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGY 87
Query: 610 FLGKLSYQQACAEKLMALPGSYIGQILRD---RKNGKIGGTSMPVQTPSMYGATTNDIYS 440
F GKLSY + C EK L S +G+ LR R++ G + S ++ + S
Sbjct: 88 FAGKLSYVKTCQEKFKKLENSPLGEALRSGQARRSSPPGHYYQKSKYDSSVSGQSSFVTS 147
Query: 439 DAGPGSSLDLDTNRPV-FSED------TYRPDN--EGPGPNLEEPIPARPSVSYDDLRRQ 287
A + L P+ FS T D+ +GP PNLEE P R +++Y++LR +
Sbjct: 148 PAADNIEM-LPHYEPIPFSSSMNESAPTGITDHIVQGPDPNLEES-PKRKNITYEELRNK 205
Query: 286 NRGQY---VKERQDP 251
NR Y + ++ DP
Sbjct: 206 NRESYEVSLTQKTDP 220
>AF323665-1|AAG45220.1| 245|Homo sapiens ovarian carcinoma
immunoreactive antigen protein.
Length = 245
Score = 94.3 bits (224), Expect = 5e-19
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Frame = -1
Query: 790 TQDEIKALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGY 611
T++E + EC+ ESF+ R P +A +T + G L +P++G PK+ LA ++GY
Sbjct: 28 TEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGY 87
Query: 610 FLGKLSYQQACAEKLMALPGSYIGQILRD---RKNGKIGGTSMPVQTPSMYGATTNDIYS 440
F GKLSY + C EK L S +G+ LR R++ G + S ++ + S
Sbjct: 88 FAGKLSYVKTCQEKFKKLENSPLGEALRSGQARRSSPPGHYYQKSKYDSSVSGQSSFVTS 147
Query: 439 DAGPGSSLDLDTNRPV-FSED------TYRPDN--EGPGPNLEEPIPARPSVSYDDLRRQ 287
A + L P+ FS T D+ +GP PNLEE P R +++Y++LR +
Sbjct: 148 PAADNIEM-LPHYEPIPFSSSMNESAPTGITDHIVQGPDPNLEES-PKRKNITYEELRNK 205
Query: 286 NRGQY---VKERQDP 251
NR Y + ++ DP
Sbjct: 206 NRESYEVSLTQKTDP 220
>AF251296-1|AAG44596.1| 245|Homo sapiens TPA018 protein.
Length = 245
Score = 94.3 bits (224), Expect = 5e-19
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Frame = -1
Query: 790 TQDEIKALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGY 611
T++E + EC+ ESF+ R P +A +T + G L +P++G PK+ LA ++GY
Sbjct: 28 TEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGY 87
Query: 610 FLGKLSYQQACAEKLMALPGSYIGQILRD---RKNGKIGGTSMPVQTPSMYGATTNDIYS 440
F GKLSY + C EK L S +G+ LR R++ G + S ++ + S
Sbjct: 88 FAGKLSYVKTCQEKFKKLENSPLGEALRSGQARRSSPPGHYYQKSKYDSSVSGQSSFVTS 147
Query: 439 DAGPGSSLDLDTNRPV-FSED------TYRPDN--EGPGPNLEEPIPARPSVSYDDLRRQ 287
A + L P+ FS T D+ +GP PNLEE P R +++Y++LR +
Sbjct: 148 PAADNIEM-LPHYEPIPFSSSMNESAPTGITDHIVQGPDPNLEES-PKRKNITYEELRNK 205
Query: 286 NRGQY---VKERQDP 251
NR Y + ++ DP
Sbjct: 206 NRESYEVSLTQKTDP 220
>AF324350-1|AAK12121.1| 187|Homo sapiens ovarian immunoreactive
antigen protein.
Length = 187
Score = 77.8 bits (183), Expect = 4e-14
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = -1
Query: 790 TQDEIKALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGY 611
T++E + EC+ ESF+ R P +A +T + G L +P++G PK+ LA ++GY
Sbjct: 28 TEEERRVFAECNDESFWFRSVPLAATSMLITQGLISKGILSSHPKYGSIPKLILACIMGY 87
Query: 610 FLGKLSYQQACAEKLMALPGSYIGQILR 527
F GKLSY + C EK L S +G+ LR
Sbjct: 88 FAGKLSYVKTCQEKFKKLENSPLGEALR 115
>AY472117-1|AAS47684.1| 154|Homo sapiens ovarian carcinoma
immunoreactive antigen-like protein protein.
Length = 154
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = -1
Query: 775 KALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKL 596
K + EC +ESF++R PFS + +T V G+L N RFG PKV LA ++G+ LGK+
Sbjct: 41 KIMRECQEESFWKRALPFSLVSMLVTQGLVYQGYLAANSRFGSLPKVALAGLLGFGLGKV 100
Query: 595 SYQQACAEK 569
SY C K
Sbjct: 101 SYIGVCQSK 109
>BC032808-1|AAH32808.1| 99|Homo sapiens OCIA domain containing 2
protein.
Length = 99
Score = 47.2 bits (107), Expect = 7e-05
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -1
Query: 775 KALEECDKESFYQRCXPFSALFASLTYAAVKYGHLKPNPRFGPFPKV 635
K + EC +ESF++R PFS + +T V G+L N RFG PKV
Sbjct: 41 KIMRECQEESFWKRALPFSLVSMLVTQGLVYQGYLAANSRFGSLPKV 87
>CR533471-1|CAG38502.1| 212|Homo sapiens PXMP4 protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -1
Query: 715 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 542
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
>BC001147-1|AAH01147.1| 212|Homo sapiens PXMP4 protein protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -1
Query: 715 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 542
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
>AL442124-2|CAH73157.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.8
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -1
Query: 550 SYIGQILRDRKNGK-IGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTY 374
SY G NG+ I GT++ +TP G+ + G G ++ L + S+D
Sbjct: 126 SYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTVSLQIFSVLNSDDAA 185
Query: 373 RPDNEGPGPNLEEPIPAR-PSVSYDDLR-RQNR 281
P E EE I +R P++ + ++ RQN+
Sbjct: 186 APALETQPQGDEEDIASRYPTLWTEQVKSRQNK 218
>AL391319-3|CAI39895.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.8
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -1
Query: 550 SYIGQILRDRKNGK-IGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTY 374
SY G NG+ I GT++ +TP G+ + G G ++ L + S+D
Sbjct: 126 SYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTVSLQIFSVLNSDDAA 185
Query: 373 RPDNEGPGPNLEEPIPAR-PSVSYDDLR-RQNR 281
P E EE I +R P++ + ++ RQN+
Sbjct: 186 APALETQPQGDEEDIASRYPTLWTEQVKSRQNK 218
>AL138918-2|CAI20434.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.8
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -1
Query: 550 SYIGQILRDRKNGK-IGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTY 374
SY G NG+ I GT++ +TP G+ + G G ++ L + S+D
Sbjct: 126 SYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTVSLQIFSVLNSDDAA 185
Query: 373 RPDNEGPGPNLEEPIPAR-PSVSYDDLR-RQNR 281
P E EE I +R P++ + ++ RQN+
Sbjct: 186 APALETQPQGDEEDIASRYPTLWTEQVKSRQNK 218
>AL109940-2|CAI20529.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.8
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -1
Query: 550 SYIGQILRDRKNGK-IGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTY 374
SY G NG+ I GT++ +TP G+ + G G ++ L + S+D
Sbjct: 126 SYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTVSLQIFSVLNSDDAA 185
Query: 373 RPDNEGPGPNLEEPIPAR-PSVSYDDLR-RQNR 281
P E EE I +R P++ + ++ RQN+
Sbjct: 186 APALETQPQGDEEDIASRYPTLWTEQVKSRQNK 218
>AL050349-1|CAC14086.1| 212|Homo sapiens peroxisomal membrane
protein 4, 24kDa protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -1
Query: 715 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 542
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
>AF072864-1|AAD43195.1| 212|Homo sapiens peroxisomal membrane
protein PMP 24 protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.8
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = -1
Query: 715 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 542
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
>AB014737-1|BAB20274.1| 457|Homo sapiens SMAP-2b protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.8
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -1
Query: 550 SYIGQILRDRKNGK-IGGTSMPVQTPSMYGATTNDIYSDAGPGSSLDLDTNRPVFSEDTY 374
SY G NG+ I GT++ +TP G+ + G G ++ L + S+D
Sbjct: 126 SYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTVSLQIFSVLNSDDAA 185
Query: 373 RPDNEGPGPNLEEPIPAR-PSVSYDDLR-RQNR 281
P E EE I +R P++ + ++ RQN+
Sbjct: 186 APALETQPQGDEEDIASRYPTLWTEQVKSRQNK 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,442,177
Number of Sequences: 237096
Number of extensions: 2743391
Number of successful extensions: 6893
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6888
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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