Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10g12
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               53   4e-09
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              39   7e-05
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              36   4e-04
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              36   6e-04
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    34   0.002
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              33   0.004
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              31   0.018
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.6  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   6.3  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   6.3  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 52.8 bits (121), Expect = 4e-09
 Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = -1

Query: 738 DCAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMTAQGVFKMNEAMSKIP-D 562
           DC ++ +V    +  +K+GD + +D +LK +  C + K G++       + +A+  +P  
Sbjct: 28  DCRKESKVSWAALKKMKAGDMEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRS 87

Query: 561 MNDKIIAEKLIDDCLSLQATTPHDAAWNYIKCHHQKDPE 445
           M D    +KL + C S+Q   P + A+  +KC+ +  PE
Sbjct: 88  MQDS--TKKLFNKCKSIQNEDPCEKAYQLVKCYVEFHPE 124


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 38.7 bits (86), Expect = 7e-05
 Identities = 19/97 (19%), Positives = 42/97 (43%)
 Frame = -1

Query: 756 LRAFQADCAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMTAQGVFKMNEAM 577
           L   Q+ C  +  +      ++  G+   ED  ++ +  C+L    ++    VFK     
Sbjct: 26  LHTEQSVCKTETGIDQQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKNNVFKPQGIK 85

Query: 576 SKIPDMNDKIIAEKLIDDCLSLQATTPHDAAWNYIKC 466
           + +  + D+   ++L+ DC ++    PH  A   ++C
Sbjct: 86  AVMELLIDENSVKQLVSDCSTISEENPHLKASKLVQC 122


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 36.3 bits (80), Expect = 4e-04
 Identities = 19/108 (17%), Positives = 48/108 (44%)
 Frame = -1

Query: 789 LMREKENEVRALRAFQADCAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMT 610
           ++   E  +  LR  ++ CAE+  +      ++K G +   D  L  +  C+L K+G + 
Sbjct: 15  ILAVSEESINKLRKIESVCAEENGIDLKKADDVKKGIFDKNDEKLACYVDCMLKKVGFVN 74

Query: 609 AQGVFKMNEAMSKIPDMNDKIIAEKLIDDCLSLQATTPHDAAWNYIKC 466
           A   F   +   +   ++ + +  +L+++C  +  +     +   ++C
Sbjct: 75  ADTTFNEEKFRERTTKLDSEQV-NRLVNNCKDITESNSCKKSSKLLQC 121


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = -1

Query: 669 EDVSLKKWALCVLMKLGLMTAQ-GVFKMNEAMSKIPDMNDKIIAEKLIDDCLSLQATTPH 493
           ED  LK +  CVL K  +M  + G  + N     IP+   +I  E +ID C ++ ++   
Sbjct: 64  EDEKLKCYFNCVLEKFNVMDKKNGKIRYNLLKKVIPEAFKEIGVE-MIDSCSNVDSSDKC 122

Query: 492 DAAWNYIKCHHQKDP 448
           + ++ ++KC ++ +P
Sbjct: 123 EKSFMFMKCMYEVNP 137


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 21/104 (20%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
 Frame = -1

Query: 735 CAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMTAQGVFKMNEAMSKIP--- 565
           C + + +  +LV  ++ G++  +D  L+ +  C+ MKL      G F  +  + ++    
Sbjct: 40  CLQKIAITEELVDGMRRGEFP-DDHDLQCYTTCI-MKLLRTFKNGNFDFDMIVKQLEITM 97

Query: 564 DMNDKIIAEKLIDDCLSLQATTPH-DAAWNYIKCHHQKDPEGNF 436
              + +I ++++  C + + T       + Y++CH++++PE  F
Sbjct: 98  PPEEVVIGKEIVAVCRNEEYTGDDCQKTYQYVQCHYKQNPEKFF 141


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 32.7 bits (71), Expect = 0.004
 Identities = 19/97 (19%), Positives = 40/97 (41%)
 Frame = -1

Query: 756 LRAFQADCAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMTAQGVFKMNEAM 577
           LR  Q  C  +  +    V ++   ++  ED   +++  C+L +  ++   G FK N   
Sbjct: 26  LRDVQEICKAESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENIVQ 85

Query: 576 SKIPDMNDKIIAEKLIDDCLSLQATTPHDAAWNYIKC 466
                  D+ + +KL+ +C  +     +      +KC
Sbjct: 86  ELTSIYLDENVIKKLVAECSVISDANIYIRFNKLVKC 122


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 30.7 bits (66), Expect = 0.018
 Identities = 18/97 (18%), Positives = 39/97 (40%)
 Frame = -1

Query: 756 LRAFQADCAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMTAQGVFKMNEAM 577
           L   Q  C  +  +    V ++   ++  ED   +++  C+L +  ++   G FK N   
Sbjct: 26  LHDVQEICKTESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFKENIVQ 85

Query: 576 SKIPDMNDKIIAEKLIDDCLSLQATTPHDAAWNYIKC 466
                  D+ + +KL+ +C  +     +      +KC
Sbjct: 86  ELTSIYLDENVIKKLVAECSVISDANIYIRFNKLVKC 122


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 775 FLSHQIVRISRHDIVIIVLW 834
           F+SH + ++SR    IIV+W
Sbjct: 160 FISHTMSKLSRAVKFIIVIW 179


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 13/78 (16%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = -1

Query: 735 CAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMT-----AQGVFKMNEAMSK 571
           CA+++ +  D+  N+++     +   L     CV+ ++ ++       + V+KM E +  
Sbjct: 40  CADELHISEDIATNIQAAKNGADMSQLGCLKACVMKRIEMLKGTELYVEPVYKMIEVV-H 98

Query: 570 IPDMNDKIIAEKLIDDCL 517
             + +D  + + + ++C+
Sbjct: 99  AGNADDIQLVKGIANECI 116


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 13/78 (16%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = -1

Query: 735 CAEDVQVKPDLVVNLKSGDWQTEDVSLKKWALCVLMKLGLMT-----AQGVFKMNEAMSK 571
           CA+++ +  D+  N+++     +   L     CV+ ++ ++       + V+KM E +  
Sbjct: 40  CADELHISEDIATNIQAAKNGADMSQLGCLKACVMKRIEMLKGTELYVEPVYKMIEVV-H 98

Query: 570 IPDMNDKIIAEKLIDDCL 517
             + +D  + + + ++C+
Sbjct: 99  AGNADDIQLVKGIANECI 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,261
Number of Sequences: 438
Number of extensions: 4757
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)