Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10g05
(708 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M27699-1|AAA28842.1| 1462|Drosophila melanogaster protein ( D.me... 31 2.0
BT001531-1|AAN71286.1| 1461|Drosophila melanogaster RE06719p pro... 31 2.0
AY094944-1|AAM11297.1| 518|Drosophila melanogaster RH57551p pro... 31 2.0
AE014296-2171|AAO41254.1| 1461|Drosophila melanogaster CG10975-P... 31 2.0
AE014296-2170|AAF49892.2| 1462|Drosophila melanogaster CG10975-P... 31 2.0
AE014296-980|AAO41276.2| 518|Drosophila melanogaster CG17795-PB... 31 2.0
AE014296-979|AAF50761.3| 518|Drosophila melanogaster CG17795-PA... 31 2.0
AY118820-1|AAM50680.1| 457|Drosophila melanogaster GH24918p pro... 30 2.7
AY049775-1|AAL12211.1| 422|Drosophila melanogaster histamine-ga... 30 2.7
AF467953-1|AAL76078.1| 426|Drosophila melanogaster histamine-ga... 30 2.7
AF435470-1|AAL74414.1| 422|Drosophila melanogaster histamine-ga... 30 2.7
AF382402-1|AAL66187.1| 422|Drosophila melanogaster histamine-ga... 30 2.7
AF382401-1|AAL66186.1| 426|Drosophila melanogaster histamine-ga... 30 2.7
AE014297-2097|AAF55238.2| 457|Drosophila melanogaster CG4546-PA... 30 2.7
AE014297-1379|AAN13530.2| 422|Drosophila melanogaster CG14723-P... 30 2.7
AE014297-1378|AAF54699.2| 426|Drosophila melanogaster CG14723-P... 30 2.7
BT003555-1|AAO39559.1| 1322|Drosophila melanogaster LP09268p pro... 30 3.5
AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p pro... 30 3.5
AY052106-1|AAK93530.1| 781|Drosophila melanogaster SD05424p pro... 30 3.5
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ... 30 3.5
AE013599-3397|AAF46847.1| 1303|Drosophila melanogaster CG6339-PA... 30 3.5
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 29 8.2
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 29 8.2
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 29 8.2
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 29 8.2
>M27699-1|AAA28842.1| 1462|Drosophila melanogaster protein (
D.melanogaster proteintyrosine phosphatase (DPTP) mRNA,
complete cds. ).
Length = 1462
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 217 LEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFK 71
+E +T T GWNP P L++ + V +SG KV ++ I++
Sbjct: 340 VETTGSTASTITIGWNPPPPDLIDYIQYYELIVSESGEVPKVIEEAIYQ 388
>BT001531-1|AAN71286.1| 1461|Drosophila melanogaster RE06719p
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 217 LEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFK 71
+E +T T GWNP P L++ + V +SG KV ++ I++
Sbjct: 340 VETTGSTASTITIGWNPPPPDLIDYIQYYELIVSESGEVPKVIEEAIYQ 388
>AY094944-1|AAM11297.1| 518|Drosophila melanogaster RH57551p
protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -3
Query: 469 TKPWSFLSGFYSFMIMCCLLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNN 290
TK WS + FY M++ L ++ +L H ++K L I RN I + L+ K N
Sbjct: 366 TKSWSAMVYFYGPMVLLILFNITMFVLTAK-HIIDSKRTLRKIARNEGRIQK-LNSDKQN 423
Query: 289 Y 287
Y
Sbjct: 424 Y 424
>AE014296-2171|AAO41254.1| 1461|Drosophila melanogaster CG10975-PB,
isoform B protein.
Length = 1461
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 217 LEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFK 71
+E +T T GWNP P L++ + V +SG KV ++ I++
Sbjct: 340 VETTGSTASTITIGWNPPPPDLIDYIQYYELIVSESGEVPKVIEEAIYQ 388
>AE014296-2170|AAF49892.2| 1462|Drosophila melanogaster CG10975-PA,
isoform A protein.
Length = 1462
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 217 LEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFK 71
+E +T T GWNP P L++ + V +SG KV ++ I++
Sbjct: 340 VETTGSTASTITIGWNPPPPDLIDYIQYYELIVSESGEVPKVIEEAIYQ 388
>AE014296-980|AAO41276.2| 518|Drosophila melanogaster CG17795-PB,
isoform B protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -3
Query: 469 TKPWSFLSGFYSFMIMCCLLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNN 290
TK WS + FY M++ L ++ +L H ++K L I RN I + L+ K N
Sbjct: 366 TKSWSAMVYFYGPMVLLILFNITMFVLTAK-HIIDSKRTLRKIARNEGRIQK-LNSDKQN 423
Query: 289 Y 287
Y
Sbjct: 424 Y 424
>AE014296-979|AAF50761.3| 518|Drosophila melanogaster CG17795-PA,
isoform A protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -3
Query: 469 TKPWSFLSGFYSFMIMCCLLSVIYLMLEYHCHTCNTKCDLNGITRNINDISRNLSLMKNN 290
TK WS + FY M++ L ++ +L H ++K L I RN I + L+ K N
Sbjct: 366 TKSWSAMVYFYGPMVLLILFNITMFVLTAK-HIIDSKRTLRKIARNEGRIQK-LNSDKQN 423
Query: 289 Y 287
Y
Sbjct: 424 Y 424
>AY118820-1|AAM50680.1| 457|Drosophila melanogaster GH24918p
protein.
Length = 457
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 304 LMKNNYEDLEIKLSKFSQELPKLEGQME 221
+MKN+ E+ + +SK QEL +L GQ++
Sbjct: 61 VMKNDLEEAKTHISKLEQELERLRGQIK 88
>AY049775-1|AAL12211.1| 422|Drosophila melanogaster histamine-gated
chloride channelsubunit B protein.
Length = 422
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 220 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 98
++E+L++TVE F WN PL++N E I+ + S N++
Sbjct: 199 MIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYT 238
>AF467953-1|AAL76078.1| 426|Drosophila melanogaster histamine-gated
chloride channelsubunit protein.
Length = 426
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 220 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 98
++E+L++TVE F WN PL++N E I+ + S N++
Sbjct: 199 MIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYT 238
>AF435470-1|AAL74414.1| 422|Drosophila melanogaster histamine-gated
chloride channelalpha2 subunit protein.
Length = 422
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 220 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 98
++E+L++TVE F WN PL++N E I+ + S N++
Sbjct: 199 MIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYT 238
>AF382402-1|AAL66187.1| 422|Drosophila melanogaster histamine-gated
chloride channelsubunit 1 variant protein.
Length = 422
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 220 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 98
++E+L++TVE F WN PL++N E I+ + S N++
Sbjct: 199 MIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYT 238
>AF382401-1|AAL66186.1| 426|Drosophila melanogaster histamine-gated
chloride channelsubunit 1 protein.
Length = 426
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 220 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 98
++E+L++TVE F WN PL++N E I+ + S N++
Sbjct: 199 MIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYT 238
>AE014297-2097|AAF55238.2| 457|Drosophila melanogaster CG4546-PA
protein.
Length = 457
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 304 LMKNNYEDLEIKLSKFSQELPKLEGQME 221
+MKN+ E+ + +SK QEL +L GQ++
Sbjct: 61 VMKNDLEEAKTHISKLEQELERLRGQIK 88
>AE014297-1379|AAN13530.2| 422|Drosophila melanogaster CG14723-PB,
isoform B protein.
Length = 422
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 220 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 98
++E+L++TVE F WN PL++N E I+ + S N++
Sbjct: 199 MIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYT 238
>AE014297-1378|AAF54699.2| 426|Drosophila melanogaster CG14723-PA,
isoform A protein.
Length = 426
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 220 ILEALANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFS 98
++E+L++TVE F WN PL++N E I+ + S N++
Sbjct: 199 MIESLSHTVEDLVFIWNMTDPLVVNTE-IELPQLDISNNYT 238
>BT003555-1|AAO39559.1| 1322|Drosophila melanogaster LP09268p protein.
Length = 1322
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = -3
Query: 349 NGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 185
N + + ++ ++R L KN+ +D +I L + Q LP+L+ ++E L + TV ++
Sbjct: 862 NAVQQQMDALNR-LREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVASE 915
>AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p
protein.
Length = 1775
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -3
Query: 331 INDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVE 191
I D+ RN+S ++ + +DLE KL +Q L + E + LE + VE
Sbjct: 782 IEDLQRNVSDLEKHAQDLETKLLARNQNLAEQEERRLQLEQRLSEVE 828
>AY052106-1|AAK93530.1| 781|Drosophila melanogaster SD05424p
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = -3
Query: 349 NGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 185
N + + ++ ++R L KN+ +D +I L + Q LP+L+ ++E L + TV ++
Sbjct: 321 NAVQQQMDALNR-LREKKNSLKDKQIHLREGLQSLPQLKERLEKLNSFLTTVASE 374
>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
protein.
Length = 2779
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -3
Query: 331 INDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVE 191
I D+ RN+S ++ + +DLE KL +Q L + E + LE + VE
Sbjct: 1786 IEDLQRNVSDLEKHAQDLETKLLARNQNLAEQEERRLQLEQRLSEVE 1832
>AE013599-3397|AAF46847.1| 1303|Drosophila melanogaster CG6339-PA
protein.
Length = 1303
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = -3
Query: 349 NGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 185
N + + ++ ++R L KN+ +D +I L + Q LP+L+ ++E L + TV ++
Sbjct: 858 NAVQQQMDALNR-LREKKNSLKDRQIHLREGLQSLPQLKERLEKLNSFLTTVASE 911
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 28.7 bits (61), Expect = 8.2
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Frame = -3
Query: 364 TKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSK-------FSQELPKLEGQMEILEAL 206
T D++ + ++D+ ++S + ED+E + + QE+ L+ Q+E L
Sbjct: 2608 TNKDVSQANKQLDDVEGSVSKLNELAEDIEEQQHRVGSQSRQLGQEIENLKAQVEAARQL 2667
Query: 205 ANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFKPDLGID*LGTDNETS 26
AN+++ + P++ L L +T + N S + +P + LG DN+T+
Sbjct: 2668 ANSIKV-GVNFKPSTILELKTPE-KTKLLATRTNLSTYFRTT--EPSGFLLYLGNDNKTA 2723
Query: 25 EDKRXHV 5
+ V
Sbjct: 2724 QKNNDFV 2730
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 28.7 bits (61), Expect = 8.2
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Frame = -3
Query: 364 TKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSK-------FSQELPKLEGQMEILEAL 206
T D++ + ++D+ ++S + ED+E + + QE+ L+ Q+E L
Sbjct: 847 TNKDVSQANKQLDDVEGSVSKLNELAEDIEEQQHRVGSQSRQLGQEIENLKAQVEAARQL 906
Query: 205 ANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFKPDLGID*LGTDNETS 26
AN+++ + P++ L L +T + N S + +P + LG DN+T+
Sbjct: 907 ANSIKV-GVNFKPSTILELKTPE-KTKLLATRTNLSTYFRTT--EPSGFLLYLGNDNKTA 962
Query: 25 EDKRXHV 5
+ V
Sbjct: 963 QKNNDFV 969
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 28.7 bits (61), Expect = 8.2
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Frame = -3
Query: 364 TKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSK-------FSQELPKLEGQMEILEAL 206
T D++ + ++D+ ++S + ED+E + + QE+ L+ Q+E L
Sbjct: 2608 TNKDVSQANKQLDDVEGSVSKLNELAEDIEEQQHRVGSQSRQLGQEIENLKAQVEAARQL 2667
Query: 205 ANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFKPDLGID*LGTDNETS 26
AN+++ + P++ L L +T + N S + +P + LG DN+T+
Sbjct: 2668 ANSIKV-GVNFKPSTILELKTPE-KTKLLATRTNLSTYFRTT--EPSGFLLYLGNDNKTA 2723
Query: 25 EDKRXHV 5
+ V
Sbjct: 2724 QKNNDFV 2730
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 28.7 bits (61), Expect = 8.2
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Frame = -3
Query: 364 TKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSK-------FSQELPKLEGQMEILEAL 206
T D++ + ++D+ ++S + ED+E + + QE+ L+ Q+E L
Sbjct: 2608 TNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLGQEIENLKAQVEAARQL 2667
Query: 205 ANTVETKDFGWNPNSPLLLNAERIQTHSVFDSGNFSKVAKQNIFKPDLGID*LGTDNETS 26
AN+++ + P++ L L +T + N S + +P + LG DN+T+
Sbjct: 2668 ANSIKV-GVNFKPSTILELKTPE-KTKLLATRTNLSTYFRTT--EPSGFLLYLGNDNKTA 2723
Query: 25 EDKRXHV 5
+ V
Sbjct: 2724 QKNNDFV 2730
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,784,215
Number of Sequences: 53049
Number of extensions: 566275
Number of successful extensions: 1993
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1993
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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