Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f24
         (782 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456403-1|CAG30289.1|  357|Homo sapiens bK268H5.4 protein.            31   4.7  
BC013696-1|AAH13696.1|  357|Homo sapiens family with sequence si...    31   4.7  
AL008718-6|CAI17949.1|  357|Homo sapiens protein ( Human DNA seq...    31   4.7  
AK000642-1|BAA91301.1|  357|Homo sapiens protein ( Homo sapiens ...    31   4.7  

>CR456403-1|CAG30289.1|  357|Homo sapiens bK268H5.4 protein.
          Length = 357

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 724 LFKTLFVFKVPNKRHGRREREMLRVNEEYFFEGRA 620
           +F+ LF++ VPNK        +L+ NE++FF+ +A
Sbjct: 242 IFQALFLYSVPNKVDLEHYMLVLKENEDHFFKHQA 276


>BC013696-1|AAH13696.1|  357|Homo sapiens family with sequence
           similarity 118, member A protein.
          Length = 357

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 724 LFKTLFVFKVPNKRHGRREREMLRVNEEYFFEGRA 620
           +F+ LF++ VPNK        +L+ NE++FF+ +A
Sbjct: 242 IFQALFLYSVPNKVDLEHYMLVLKENEDHFFKHQA 276


>AL008718-6|CAI17949.1|  357|Homo sapiens protein ( Human DNA
           sequence from clone CTA-268H5 on chromosome
           22q13.2-13.3. ).
          Length = 357

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 724 LFKTLFVFKVPNKRHGRREREMLRVNEEYFFEGRA 620
           +F+ LF++ VPNK        +L+ NE++FF+ +A
Sbjct: 242 IFQALFLYSVPNKVDLEHYMLVLKENEDHFFKHQA 276


>AK000642-1|BAA91301.1|  357|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20635 fis, clone KAT03466. ).
          Length = 357

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 724 LFKTLFVFKVPNKRHGRREREMLRVNEEYFFEGRA 620
           +F+ LF++ VPNK        +L+ NE++FF+ +A
Sbjct: 242 IFQALFLYSVPNKVDLEHYMLVLKENEDHFFKHQA 276


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,226,439
Number of Sequences: 237096
Number of extensions: 2098506
Number of successful extensions: 5367
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5366
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)