Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f22
         (467 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4D0D Cluster: PREDICTED: similar to ENSANGP000...    37   0.25 
UniRef50_Q1DT10 Cluster: Putative uncharacterized protein; n=2; ...    33   3.1  
UniRef50_Q2H526 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_Q24E29 Cluster: Methyltransferase, UbiE/COQ5 family pro...    32   5.4  
UniRef50_Q8N726 Cluster: Cyclin-dependent kinase inhibitor 2A, i...    32   5.4  
UniRef50_Q5JLK9 Cluster: Putative uncharacterized protein B1144D...    32   7.2  
UniRef50_A5UTV5 Cluster: Putative uncharacterized protein; n=2; ...    31   9.5  
UniRef50_Q7R446 Cluster: GLP_254_33899_38782; n=1; Giardia lambl...    31   9.5  

>UniRef50_UPI00015B4D0D Cluster: PREDICTED: similar to
            ENSANGP00000019133; n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to ENSANGP00000019133 - Nasonia
            vitripennis
          Length = 2223

 Score = 36.7 bits (81), Expect = 0.25
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
 Frame = +2

Query: 17   SGRSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERRSGTETA*LQTPIAV 196
            S +  T PN  T  A+S Q+  R +  DA   S+ +    S +E R GT      TP  +
Sbjct: 757  SSKGATAPNAGTGAASSAQNRRRAQ-GDAPAGSSSSANKDSRKEDREGTPATRSTTPSPL 815

Query: 197  LIRVWRLTDHFTTASNGSDSSSRGTEYSTTC-----RTAR-KAYSKARMACD 334
               + R     TTA+N +   +R T+ ++       RT R   ++ A  AC+
Sbjct: 816  TSCISRTKSPATTANNRTTRMTRNTDLTSLASELGRRTRRTSGHTDAMAACE 867


>UniRef50_Q1DT10 Cluster: Putative uncharacterized protein; n=2;
            Onygenales|Rep: Putative uncharacterized protein -
            Coccidioides immitis
          Length = 1154

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 27/97 (27%), Positives = 44/97 (45%)
 Frame = +2

Query: 14   LSGRSPTFPNIRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERRSGTETA*LQTPIA 193
            +SGR    P  R +++ S+ SS       A  +ST +    S   R    + A +QTP  
Sbjct: 1035 VSGRVSPNPFARPSSSLSMVSS----IATASNASTTSASSKSHVSREKPAKLA-VQTPSG 1089

Query: 194  VLIRVWRLTDHFTTASNGSDSSSRGTEYSTTCRTARK 304
             ++R+ R  DH  T S  ++ ++ GT   +   T  K
Sbjct: 1090 KILRLSRKADHMITTSTATEWANDGTPDGSVWETVIK 1126


>UniRef50_Q2H526 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 418

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = -3

Query: 171 AVSVPERRSSDEYGRRARVELRSASWHRGLQELWRLFAVVVR 46
           A+ V  R +S E GRR ++ + +A+WHR ++  WRL   V R
Sbjct: 333 AIGVETRTASLEDGRR-QLGVYTAAWHRRMEHEWRLSFTVDR 373


>UniRef50_Q24E29 Cluster: Methyltransferase, UbiE/COQ5 family
           protein; n=4; Tetrahymena thermophila SB210|Rep:
           Methyltransferase, UbiE/COQ5 family protein -
           Tetrahymena thermophila SB210
          Length = 268

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 449 QTIPTIEIFWDQFNTEISLQSSGSKTTKPSRAKM 348
           QTI  +E FWD+F+ + S   SGS     S A M
Sbjct: 4   QTIKDVETFWDEFSEDYSSYDSGSNVLFLSLANM 37


>UniRef50_Q8N726 Cluster: Cyclin-dependent kinase inhibitor 2A,
           isoform 4; n=16; Eutheria|Rep: Cyclin-dependent kinase
           inhibitor 2A, isoform 4 - Homo sapiens (Human)
          Length = 173

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 34  IPQHPNHDSEQPPELLKAAVPRRGAKL 114
           +P+ P HD  Q P    AA PRRGA+L
Sbjct: 101 LPRRPGHDDGQRPSGGAAAAPRRGAQL 127


>UniRef50_Q5JLK9 Cluster: Putative uncharacterized protein
           B1144D11.2; n=3; Oryza sativa|Rep: Putative
           uncharacterized protein B1144D11.2 - Oryza sativa subsp.
           japonica (Rice)
          Length = 874

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +2

Query: 44  IRTTTANSLQSS*RPRCHDAERSSTRALRPYSSEERR 154
           ++T T +   +S RPR  D+E  ++  L PYSSE++R
Sbjct: 583 MQTITDSGEDNSRRPRSGDSEIPNSSKLEPYSSEQQR 619


>UniRef50_A5UTV5 Cluster: Putative uncharacterized protein; n=2;
           Roseiflexus|Rep: Putative uncharacterized protein -
           Roseiflexus sp. RS-1
          Length = 676

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 28  ADIPQHPNHDSEQPPELLKAAVPRRGAKLNARSTSILVRGASLGNGD 168
           AD P++ ++  +  PELL   V  RG  +NAR  ++ VR   +G  D
Sbjct: 274 ADTPENRHNRYKVSPELLDFRVESRGGTVNARH-AVTVRNEVIGRSD 319


>UniRef50_Q7R446 Cluster: GLP_254_33899_38782; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_254_33899_38782 - Giardia lamblia
            ATCC 50803
          Length = 1627

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = +1

Query: 22   PVADIPQHPNHD---SEQPPELLKAAVPRRGAKLNARSTSILVRGASLGNGDSVTSNAHR 192
            P   IPQ+P      S  PP + KAA    GAK  A S + ++ G++ G+G S +S    
Sbjct: 1463 PKHHIPQYPPMGPPASNVPPAIDKAA-DELGAKPGATSQTSIISGSAGGSGTSKSSGGSG 1521

Query: 193  SS 198
            SS
Sbjct: 1522 SS 1523


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,667,079
Number of Sequences: 1657284
Number of extensions: 7639961
Number of successful extensions: 28269
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28256
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)