Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f21
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p pro...    31   2.3  
AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA...    31   2.3  
AE014298-1353|AAF46512.2|  437|Drosophila melanogaster CG3099-PB...    29   9.5  

>AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p
           protein.
          Length = 916

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -3

Query: 119 YTSAISMSLPTI--TCCRQVDFFNLSLIQDGAPYFYPQFI 6
           Y +A+S ++ T+  T C ++D    +++ D APY YP  I
Sbjct: 599 YPAALSSNIGTLNSTACGRIDIMG-TIVYDSAPYLYPFII 637


>AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA
           protein.
          Length = 916

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -3

Query: 119 YTSAISMSLPTI--TCCRQVDFFNLSLIQDGAPYFYPQFI 6
           Y +A+S ++ T+  T C ++D    +++ D APY YP  I
Sbjct: 599 YPAALSSNIGTLNSTACGRIDIMG-TIVYDSAPYLYPFII 637


>AE014298-1353|AAF46512.2|  437|Drosophila melanogaster CG3099-PB
           protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = -1

Query: 241 SFEIFNTYCIFFNYTSHEKY*ICHSDILHCV*NCYSFYILPTLALFR*VFQQ*LAVDRWT 62
           S E+FN Y   F Y++++ Y +  S +   V NC+ ++      L   +  Q L +D   
Sbjct: 133 SRELFNPYYGLFEYSANDTYTVQVSPLSAFVDNCHDWFRFSGRVLGLALVHQYL-LD--A 189

Query: 61  FSTCPLYKMALLTSTLNLS 5
           F T P YK ALL   + LS
Sbjct: 190 FFTRPFYK-ALLRLPVALS 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,832,957
Number of Sequences: 53049
Number of extensions: 631933
Number of successful extensions: 1806
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1806
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)