Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f18
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical pr...   295   2e-80
U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical pr...   295   2e-80
U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical pr...   295   2e-80
Z81081-4|CAB03092.2|  491|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AL023825-1|CAA19442.2|  491|Caenorhabditis elegans Hypothetical ...    30   2.1  
AF052060-1|AAC06226.1|  491|Caenorhabditis elegans Olf-1/EBF tra...    30   2.1  
AF025465-8|AAO38628.1|  233|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase...    28   8.5  

>U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical protein
            C34F11.3a protein.
          Length = 740

 Score =  295 bits (724), Expect = 2e-80
 Identities = 139/241 (57%), Positives = 166/241 (68%)
 Frame = -3

Query: 773  HKFLAHVIGFDSVDDESKPEIPNLSEHMRTPEEWNDXXXXXXXXXXXXXXXXMVTLNELR 594
            H FL  + G DSVDDESK E  N       P E+ D                +  LN  R
Sbjct: 492  HLFLQQISGIDSVDDESKHEFVNFDRSTPCPPEYTDLENPPYNYYLFYMYRNICALNAFR 551

Query: 593  KEQGLNTFVLRPHCGEAGPAAHLSAGFLLAENISHGLILRKVPVXXXXXXXXXXXXAMSP 414
            + +GLNTF LRPHCGEAG  +HL  G+L +E+I+HG++LRKVPV            AMSP
Sbjct: 552  RARGLNTFALRPHCGEAGHVSHLLTGYLTSESIAHGILLRKVPVLQYLYYLTQIGIAMSP 611

Query: 413  LSNNSLFLNYHRNPLPEYFARGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDM 234
            LSNNSLF++Y RNPLPEY  +GL V+LSTDDPLQFH+T+E LMEE+SIAAQ WKLSSCDM
Sbjct: 612  LSNNSLFISYQRNPLPEYLQKGLNVSLSTDDPLQFHYTKEALMEEFSIAAQVWKLSSCDM 671

Query: 233  CELARNSVLMSGFPHEMKQYWLGAQYVHEGPAGNDITKTNVPDVRISFRHETLLDELDNL 54
            CELARNSV+ SGF  ++K +WLG  Y  EG  GNDI +TNVPD+R+SFRHE L+DEL NL
Sbjct: 672  CELARNSVMQSGFEDKVKIHWLGPNYKEEGVLGNDIHRTNVPDIRVSFRHEALVDELYNL 731

Query: 53   F 51
            F
Sbjct: 732  F 732


>U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical protein
            C34F11.3c protein.
          Length = 803

 Score =  295 bits (724), Expect = 2e-80
 Identities = 139/241 (57%), Positives = 166/241 (68%)
 Frame = -3

Query: 773  HKFLAHVIGFDSVDDESKPEIPNLSEHMRTPEEWNDXXXXXXXXXXXXXXXXMVTLNELR 594
            H FL  + G DSVDDESK E  N       P E+ D                +  LN  R
Sbjct: 555  HLFLQQISGIDSVDDESKHEFVNFDRSTPCPPEYTDLENPPYNYYLFYMYRNICALNAFR 614

Query: 593  KEQGLNTFVLRPHCGEAGPAAHLSAGFLLAENISHGLILRKVPVXXXXXXXXXXXXAMSP 414
            + +GLNTF LRPHCGEAG  +HL  G+L +E+I+HG++LRKVPV            AMSP
Sbjct: 615  RARGLNTFALRPHCGEAGHVSHLLTGYLTSESIAHGILLRKVPVLQYLYYLTQIGIAMSP 674

Query: 413  LSNNSLFLNYHRNPLPEYFARGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDM 234
            LSNNSLF++Y RNPLPEY  +GL V+LSTDDPLQFH+T+E LMEE+SIAAQ WKLSSCDM
Sbjct: 675  LSNNSLFISYQRNPLPEYLQKGLNVSLSTDDPLQFHYTKEALMEEFSIAAQVWKLSSCDM 734

Query: 233  CELARNSVLMSGFPHEMKQYWLGAQYVHEGPAGNDITKTNVPDVRISFRHETLLDELDNL 54
            CELARNSV+ SGF  ++K +WLG  Y  EG  GNDI +TNVPD+R+SFRHE L+DEL NL
Sbjct: 735  CELARNSVMQSGFEDKVKIHWLGPNYKEEGVLGNDIHRTNVPDIRVSFRHEALVDELYNL 794

Query: 53   F 51
            F
Sbjct: 795  F 795


>U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical protein
            C34F11.3b protein.
          Length = 764

 Score =  295 bits (724), Expect = 2e-80
 Identities = 139/241 (57%), Positives = 166/241 (68%)
 Frame = -3

Query: 773  HKFLAHVIGFDSVDDESKPEIPNLSEHMRTPEEWNDXXXXXXXXXXXXXXXXMVTLNELR 594
            H FL  + G DSVDDESK E  N       P E+ D                +  LN  R
Sbjct: 516  HLFLQQISGIDSVDDESKHEFVNFDRSTPCPPEYTDLENPPYNYYLFYMYRNICALNAFR 575

Query: 593  KEQGLNTFVLRPHCGEAGPAAHLSAGFLLAENISHGLILRKVPVXXXXXXXXXXXXAMSP 414
            + +GLNTF LRPHCGEAG  +HL  G+L +E+I+HG++LRKVPV            AMSP
Sbjct: 576  RARGLNTFALRPHCGEAGHVSHLLTGYLTSESIAHGILLRKVPVLQYLYYLTQIGIAMSP 635

Query: 413  LSNNSLFLNYHRNPLPEYFARGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDM 234
            LSNNSLF++Y RNPLPEY  +GL V+LSTDDPLQFH+T+E LMEE+SIAAQ WKLSSCDM
Sbjct: 636  LSNNSLFISYQRNPLPEYLQKGLNVSLSTDDPLQFHYTKEALMEEFSIAAQVWKLSSCDM 695

Query: 233  CELARNSVLMSGFPHEMKQYWLGAQYVHEGPAGNDITKTNVPDVRISFRHETLLDELDNL 54
            CELARNSV+ SGF  ++K +WLG  Y  EG  GNDI +TNVPD+R+SFRHE L+DEL NL
Sbjct: 696  CELARNSVMQSGFEDKVKIHWLGPNYKEEGVLGNDIHRTNVPDIRVSFRHEALVDELYNL 755

Query: 53   F 51
            F
Sbjct: 756  F 756


>Z81081-4|CAB03092.2|  491|Caenorhabditis elegans Hypothetical
           protein Y16B4A.1 protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 523 LRCAAGPASPQWGRSTNVFSPCSLR 597
           L+ A G ASP WG S  + SP ++R
Sbjct: 298 LQVAFGTASPNWGESVQLISPHAIR 322


>AL023825-1|CAA19442.2|  491|Caenorhabditis elegans Hypothetical
           protein Y16B4A.1 protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 523 LRCAAGPASPQWGRSTNVFSPCSLR 597
           L+ A G ASP WG S  + SP ++R
Sbjct: 298 LQVAFGTASPNWGESVQLISPHAIR 322


>AF052060-1|AAC06226.1|  491|Caenorhabditis elegans Olf-1/EBF
           transcription factor protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 523 LRCAAGPASPQWGRSTNVFSPCSLR 597
           L+ A G ASP WG S  + SP ++R
Sbjct: 298 LQVAFGTASPNWGESVQLISPHAIR 322


>AF025465-8|AAO38628.1|  233|Caenorhabditis elegans Hypothetical
           protein K02E7.4 protein.
          Length = 233

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
 Frame = -3

Query: 356 ARGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARN-SVLMSGFPHEMK 180
           +RG ++++  D+ L      EPL   Y  +       S  +    +N +   +G+   + 
Sbjct: 37  SRGFKISIINDEQLLQILAEEPLKGVYRDSNNFQNFFSKLLNFSEKNDNAYENGWSARII 96

Query: 179 QYWLGAQYVHEGPAGNDITKTNV 111
            +  G   V  GP+GNDI +TNV
Sbjct: 97  TWPAGPYKVIPGPSGNDIGETNV 119


>Z98860-1|CAB11544.1|  677|Caenorhabditis elegans Hypothetical
           protein Y26G10.1 protein.
          Length = 677

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 308 HFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGF 195
           H   EP+  EY   ++ WKL+   +C LA ++ L   F
Sbjct: 356 HGLLEPIFLEYCSISEIWKLTGVCVCSLAPDTSLSLNF 393


>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
           protein F31B12.1c protein.
          Length = 1895

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 353 RGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQY 174
           +G+ +  S D  ++  + R   MEE S+    WK+S   +  L+ N  +    P ++ Q+
Sbjct: 455 KGVELVDSYDIDIEAIYRRHS-MEEMSVPVSCWKVSHGQL--LSDNEFIYFLAPQQIAQF 511

Query: 173 W 171
           W
Sbjct: 512 W 512


>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
           protein F31B12.1b protein.
          Length = 1868

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 353 RGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQY 174
           +G+ +  S D  ++  + R   MEE S+    WK+S   +  L+ N  +    P ++ Q+
Sbjct: 455 KGVELVDSYDIDIEAIYRRHS-MEEMSVPVSCWKVSHGQL--LSDNEFIYFLAPQQIAQF 511

Query: 173 W 171
           W
Sbjct: 512 W 512


>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
           protein F31B12.1a protein.
          Length = 1898

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 353 RGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQY 174
           +G+ +  S D  ++  + R   MEE S+    WK+S   +  L+ N  +    P ++ Q+
Sbjct: 455 KGVELVDSYDIDIEAIYRRHS-MEEMSVPVSCWKVSHGQL--LSDNEFIYFLAPQQIAQF 511

Query: 173 W 171
           W
Sbjct: 512 W 512


>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
           protein F31B12.1c protein.
          Length = 1895

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 353 RGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQY 174
           +G+ +  S D  ++  + R   MEE S+    WK+S   +  L+ N  +    P ++ Q+
Sbjct: 455 KGVELVDSYDIDIEAIYRRHS-MEEMSVPVSCWKVSHGQL--LSDNEFIYFLAPQQIAQF 511

Query: 173 W 171
           W
Sbjct: 512 W 512


>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
           protein F31B12.1b protein.
          Length = 1868

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 353 RGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQY 174
           +G+ +  S D  ++  + R   MEE S+    WK+S   +  L+ N  +    P ++ Q+
Sbjct: 455 KGVELVDSYDIDIEAIYRRHS-MEEMSVPVSCWKVSHGQL--LSDNEFIYFLAPQQIAQF 511

Query: 173 W 171
           W
Sbjct: 512 W 512


>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
           protein F31B12.1a protein.
          Length = 1898

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 353 RGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQY 174
           +G+ +  S D  ++  + R   MEE S+    WK+S   +  L+ N  +    P ++ Q+
Sbjct: 455 KGVELVDSYDIDIEAIYRRHS-MEEMSVPVSCWKVSHGQL--LSDNEFIYFLAPQQIAQF 511

Query: 173 W 171
           W
Sbjct: 512 W 512


>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
           PLC210 protein.
          Length = 1898

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 353 RGLRVTLSTDDPLQFHFTREPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQY 174
           +G+ +  S D  ++  + R   MEE S+    WK+S   +  L+ N  +    P ++ Q+
Sbjct: 455 KGVELVDSYDIDIEAIYRRHS-MEEMSVPVSCWKVSHGQL--LSDNEFIYFLAPQQIAQF 511

Query: 173 W 171
           W
Sbjct: 512 W 512


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,087,269
Number of Sequences: 27780
Number of extensions: 261951
Number of successful extensions: 815
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)