Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10f17
(755 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein. 214 1e-55
AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p pro... 214 1e-55
BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p pro... 203 2e-52
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 203 2e-52
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 190 1e-48
AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p pro... 33 0.42
AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-P... 33 0.42
BT021376-1|AAX33524.1| 758|Drosophila melanogaster LD46788p pro... 28 1.6
AE014298-972|AAF46216.3| 758|Drosophila melanogaster CG33691-PA... 28 1.6
AE014298-971|AAZ52507.1| 702|Drosophila melanogaster CG33691-PC... 28 1.7
AY069707-1|AAL39852.1| 1132|Drosophila melanogaster LD47924p pro... 30 3.0
AE014134-1133|AAF52418.2| 1132|Drosophila melanogaster CG11181-P... 30 3.0
AF004917-1|AAB64427.1| 1132|Drosophila melanogaster cup protein. 30 3.9
AE014134-2600|AAF53460.2| 1073|Drosophila melanogaster CG18482-P... 30 3.9
U42204-1|AAB50956.1| 855|Drosophila melanogaster putative potas... 29 9.1
U36925-1|AAB50936.1| 855|Drosophila melanogaster seizure potass... 29 9.1
AY058350-1|AAL13579.1| 855|Drosophila melanogaster GH12235p pro... 29 9.1
AE013599-3790|AAF47148.1| 855|Drosophila melanogaster CG3182-PB... 29 9.1
AE013599-3789|AAM68296.1| 855|Drosophila melanogaster CG3182-PA... 29 9.1
>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
Length = 1607
Score = 214 bits (522), Expect = 1e-55
Identities = 104/194 (53%), Positives = 131/194 (67%)
Frame = -1
Query: 707 EGINFHLCPPYSPHFGGLWEAGVKSIKFHMHRVLGNCNLTYEELITVLTQIEAILNSRPL 528
EGI++H PP +PHFGG+WEAGV+SIK HM R+LG+ LT+EEL TVLTQIEAILNSRPL
Sbjct: 1413 EGISWHFIPPSAPHFGGMWEAGVRSIKLHMKRILGSKALTFEELSTVLTQIEAILNSRPL 1472
Query: 527 TPLSSDPDDMMPLTPGHFLIGQPLTAMPAAEYKDCRLSNLTRFQRLELMRQHFWARWSKE 348
P + D PLTP HFL G P TA+P D +++ L R+ +L+ M Q FW RW E
Sbjct: 1473 CPTGDNSLD--PLTPAHFLTGSPYTALPEPCRLDMQVNRLERWNQLQAMVQGFWKRWHME 1530
Query: 347 YISELQQRTKWRTNQSSLKLHSLVVVKEDNLSPLKWRLGRIVAVYPGSDGVNRVADICTS 168
Y++ L +RTKW +LK+ +LVV+KE NL P KW LGRI AV+ G D RV + T+
Sbjct: 1531 YLTSLHERTKWHLETENLKIDTLVVLKEPNLPPSKWILGRITAVHAGIDNKVRVVTVKTA 1590
Query: 167 SGVIKRFFNKICPL 126
G+ KR KI L
Sbjct: 1591 HGLYKRPIAKIAVL 1604
>AY119280-1|AAM51140.1| 1015|Drosophila melanogaster SD27140p protein.
Length = 1015
Score = 214 bits (522), Expect = 1e-55
Identities = 104/194 (53%), Positives = 131/194 (67%)
Frame = -1
Query: 707 EGINFHLCPPYSPHFGGLWEAGVKSIKFHMHRVLGNCNLTYEELITVLTQIEAILNSRPL 528
EGI++H PP +PHFGG+WEAGV+SIK HM R+LG+ LT+EEL TVLTQIEAILNSRPL
Sbjct: 821 EGISWHFIPPSAPHFGGMWEAGVRSIKLHMKRILGSKALTFEELSTVLTQIEAILNSRPL 880
Query: 527 TPLSSDPDDMMPLTPGHFLIGQPLTAMPAAEYKDCRLSNLTRFQRLELMRQHFWARWSKE 348
P + D PLTP HFL G P TA+P D +++ L R+ +L+ M Q FW RW E
Sbjct: 881 CPTGDNSLD--PLTPAHFLTGSPYTALPEPCRLDMQVNRLERWNQLQAMVQGFWKRWHME 938
Query: 347 YISELQQRTKWRTNQSSLKLHSLVVVKEDNLSPLKWRLGRIVAVYPGSDGVNRVADICTS 168
Y++ L +RTKW +LK+ +LVV+KE NL P KW LGRI AV+ G D RV + T+
Sbjct: 939 YLTSLHERTKWHLETENLKIDTLVVLKEPNLPPSKWILGRITAVHAGIDNKVRVVTVKTA 998
Query: 167 SGVIKRFFNKICPL 126
G+ KR KI L
Sbjct: 999 HGLYKRPIAKIAVL 1012
>BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p protein.
Length = 733
Score = 203 bits (496), Expect = 2e-52
Identities = 100/206 (48%), Positives = 134/206 (65%)
Frame = -1
Query: 752 FLKSNCNSLPDALIEEGINFHLCPPYSPHFGGLWEAGVKSIKFHMHRVLGNCNLTYEELI 573
FL++ S+ DA +G+ + PP +PH GGLWEAGVKS K + T+EEL
Sbjct: 513 FLQAIKESVTDAYSHQGLVWRFIPPGAPHMGGLWEAGVKSFKTLFLKSTSVRKYTFEELA 572
Query: 572 TVLTQIEAILNSRPLTPLSSDPDDMMPLTPGHFLIGQPLTAMPAAEYKDCRLSNLTRFQR 393
T+L +IEA LNSRPL+P+S DP D++ LTPGHFLIG PL + E K S + R+Q
Sbjct: 573 TLLAKIEACLNSRPLSPMSEDPSDLLALTPGHFLIGGPLLSTAEPEIKGEAKSIINRWQH 632
Query: 392 LELMRQHFWARWSKEYISELQQRTKWRTNQSSLKLHSLVVVKEDNLSPLKWRLGRIVAVY 213
L+ Q F ARW +EY+ EL +R+KW+ +L+ +VVVKEDNL P +WRLGRIV+ +
Sbjct: 633 LKAQHQQFSARWKEEYLKELHKRSKWQFPTRNLQADDMVVVKEDNLPPNEWRLGRIVSAF 692
Query: 212 PGSDGVNRVADICTSSGVIKRFFNKI 135
PG+D RV +I TS G IKR +K+
Sbjct: 693 PGADERIRVVEIRTSRGTIKRPVHKV 718
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 203 bits (496), Expect = 2e-52
Identities = 100/206 (48%), Positives = 134/206 (65%)
Frame = -1
Query: 752 FLKSNCNSLPDALIEEGINFHLCPPYSPHFGGLWEAGVKSIKFHMHRVLGNCNLTYEELI 573
FL++ S+ DA +G+ + PP +PH GGLWEAGVKS K + T+EEL
Sbjct: 1610 FLQAIKESVTDAYSHQGLVWRFIPPGAPHMGGLWEAGVKSFKTLFLKSTSVRKYTFEELA 1669
Query: 572 TVLTQIEAILNSRPLTPLSSDPDDMMPLTPGHFLIGQPLTAMPAAEYKDCRLSNLTRFQR 393
T+L +IEA LNSRPL+P+S DP D++ LTPGHFLIG PL + E K S + R+Q
Sbjct: 1670 TLLAKIEACLNSRPLSPMSEDPSDLLALTPGHFLIGGPLLSTAEPEIKGEAKSIINRWQH 1729
Query: 392 LELMRQHFWARWSKEYISELQQRTKWRTNQSSLKLHSLVVVKEDNLSPLKWRLGRIVAVY 213
L+ Q F ARW +EY+ EL +R+KW+ +L+ +VVVKEDNL P +WRLGRIV+ +
Sbjct: 1730 LKAQHQQFSARWKEEYLKELHKRSKWQFPTRNLQADDMVVVKEDNLPPNEWRLGRIVSAF 1789
Query: 212 PGSDGVNRVADICTSSGVIKRFFNKI 135
PG+D RV +I TS G IKR +K+
Sbjct: 1790 PGADERIRVVEIRTSRGTIKRPVHKV 1815
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 190 bits (464), Expect = 1e-48
Identities = 85/197 (43%), Positives = 129/197 (65%)
Frame = -1
Query: 716 LIEEGINFHLCPPYSPHFGGLWEAGVKSIKFHMHRVLGNCNLTYEELITVLTQIEAILNS 537
L ++ I++H PP PHFGG+WEAGVKS+K+H+ R++G+ TYEE+ T+L QIEA LNS
Sbjct: 1558 LEKDRIDWHFIPPAGPHFGGIWEAGVKSMKYHLKRIIGDTIFTYEEMSTLLCQIEACLNS 1617
Query: 536 RPLTPLSSDPDDMMPLTPGHFLIGQPLTAMPAAEYKDCRLSNLTRFQRLELMRQHFWARW 357
RPL + S+ D LTPGHFLIG+P + +D ++ NL R++ ++ +++ FW +W
Sbjct: 1618 RPLYTIVSEKDQQEVLTPGHFLIGRPPLEI-VEPMEDEKIGNLDRWRLIQKIKKDFWVKW 1676
Query: 356 SKEYISELQQRTKWRTNQSSLKLHSLVVVKEDNLSPLKWRLGRIVAVYPGSDGVNRVADI 177
EY+ LQQR KW+ +++ +V++K++N P +W LG++ V+ G+D RVA +
Sbjct: 1677 KSEYLHTLQQRNKWKKEIPNIEEGQIVLLKDENCHPARWPLGKVEKVHKGNDDKVRVAKV 1736
Query: 176 CTSSGVIKRFFNKICPL 126
G I R KICPL
Sbjct: 1737 KMQEGYITRPITKICPL 1753
>AY118688-1|AAM50548.1| 709|Drosophila melanogaster AT15442p
protein.
Length = 709
Score = 33.1 bits (72), Expect = 0.42
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Frame = -1
Query: 743 SNCNSLPDALIEEGINFHLCPPYSPHFGGLWEAGVKS----------IKFHMHRVLGNCN 594
S+C SLPD + H PP + GL KS + R N +
Sbjct: 581 SSCRSLPDISSHSRLWPHK-PPSAMSIQGLIFGAAKSGEPGPAVPMATSSNREREKMNVH 639
Query: 593 LTYEELITVLTQIEAILNSRPLTPLSSDPDDMMPL--TPGHFLIGQPLTAMP 444
EEL L ILNSR +PL ++PL G+FL+ +PL+ +P
Sbjct: 640 WREEELQEDLVLRREILNSRESSPLRRPGQVLIPLPRLEGNFLMNRPLSLLP 691
>AE014298-3210|AAF50936.1| 709|Drosophila melanogaster CG12446-PA
protein.
Length = 709
Score = 33.1 bits (72), Expect = 0.42
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Frame = -1
Query: 743 SNCNSLPDALIEEGINFHLCPPYSPHFGGLWEAGVKS----------IKFHMHRVLGNCN 594
S+C SLPD + H PP + GL KS + R N +
Sbjct: 581 SSCRSLPDISSHSRLWPHK-PPSAMSIQGLIFGAAKSGEPGPAVPMATSSNREREKMNVH 639
Query: 593 LTYEELITVLTQIEAILNSRPLTPLSSDPDDMMPL--TPGHFLIGQPLTAMP 444
EEL L ILNSR +PL ++PL G+FL+ +PL+ +P
Sbjct: 640 WREEELQEDLVLRREILNSRESSPLRRPGQVLIPLPRLEGNFLMNRPLSLLP 691
>BT021376-1|AAX33524.1| 758|Drosophila melanogaster LD46788p
protein.
Length = 758
Score = 27.9 bits (59), Expect(2) = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 755 TFLKSNCNSLPDALIEEGINFHLCPPYSPHFGGL 654
TF+++N NS A + ++ PP SP GGL
Sbjct: 325 TFIQTNSNSNNSANQNHLVPSYISPPMSPSVGGL 358
Score = 21.8 bits (44), Expect(2) = 1.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 551 AILNSRPLTPLSSDPD-DMMPLTPGHFL 471
A+ N LT L+S+P+ + P PGHFL
Sbjct: 363 AMSNVATLT-LASNPNVTITPQLPGHFL 389
>AE014298-972|AAF46216.3| 758|Drosophila melanogaster CG33691-PA,
isoform A protein.
Length = 758
Score = 27.9 bits (59), Expect(2) = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 755 TFLKSNCNSLPDALIEEGINFHLCPPYSPHFGGL 654
TF+++N NS A + ++ PP SP GGL
Sbjct: 325 TFIQTNSNSNNSANQNHLVPSYISPPMSPSVGGL 358
Score = 21.8 bits (44), Expect(2) = 1.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 551 AILNSRPLTPLSSDPD-DMMPLTPGHFL 471
A+ N LT L+S+P+ + P PGHFL
Sbjct: 363 AMSNVATLT-LASNPNVTITPQLPGHFL 389
>AE014298-971|AAZ52507.1| 702|Drosophila melanogaster CG33691-PC,
isoform C protein.
Length = 702
Score = 27.9 bits (59), Expect(2) = 1.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 755 TFLKSNCNSLPDALIEEGINFHLCPPYSPHFGGL 654
TF+++N NS A + ++ PP SP GGL
Sbjct: 269 TFIQTNSNSNNSANQNHLVPSYISPPMSPSVGGL 302
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 551 AILNSRPLTPLSSDPD-DMMPLTPGHFL 471
A+ N LT L+S+P+ + P PGHFL
Sbjct: 307 AMSNVATLT-LASNPNVTITPQLPGHFL 333
>AY069707-1|AAL39852.1| 1132|Drosophila melanogaster LD47924p protein.
Length = 1132
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 GQPLTAMPAAEYKDCRLSNLTRFQRLELMRQHFWARWSKEYISELQQRTKWRTNQ-SSLK 291
G P+ P + + R + FQ E + HF ++ ++Y QQ + Q +SL
Sbjct: 1041 GYPMNGQPQKHHSNLRFGDNQNFQSFESNQPHFATQYKQQYQQSQQQHPHQQPQQLNSLH 1100
Query: 290 LHSLVVVKEDNLSPLK 243
++ V N + ++
Sbjct: 1101 QNNAGAVNSFNKAQMQ 1116
>AE014134-1133|AAF52418.2| 1132|Drosophila melanogaster CG11181-PA
protein.
Length = 1132
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 GQPLTAMPAAEYKDCRLSNLTRFQRLELMRQHFWARWSKEYISELQQRTKWRTNQ-SSLK 291
G P+ P + + R + FQ E + HF ++ ++Y QQ + Q +SL
Sbjct: 1041 GYPMNGQPQKHHSNLRFGDNQNFQSFESNQPHFATQYKQQYQQSQQQHPHQQPQQLNSLH 1100
Query: 290 LHSLVVVKEDNLSPLK 243
++ V N + ++
Sbjct: 1101 QNNAGAVNSFNKAQMQ 1116
>AF004917-1|AAB64427.1| 1132|Drosophila melanogaster cup protein.
Length = 1132
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -1
Query: 467 GQPLTAMPAAEYKDCRLSNLTRFQRLELMRQHFWARWSKEYISELQQRTKWRTNQ-SSLK 291
G P+ P + + R + FQ E + HF ++ ++Y QQ + Q +SL
Sbjct: 1041 GYPMKGQPQQHHSNLRFGDNQNFQSFESNQPHFATQYKQQYQQSQQQHPHQQPQQLNSLH 1100
Query: 290 LHSLVVVKEDNLSPLK 243
++ V N + ++
Sbjct: 1101 QNNAGAVNSFNKAQMQ 1116
>AE014134-2600|AAF53460.2| 1073|Drosophila melanogaster CG18482-PA
protein.
Length = 1073
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 385 SSNRWNLVRLLSRQSLYSAAGIAVRGWPMRKCPGVSGIM 501
+S++ LVR++ +A ++ RGWP +C G G +
Sbjct: 80 NSSQPQLVRIIGDPGRVAAETLSTRGWPTSRCRGELGAL 118
>U42204-1|AAB50956.1| 855|Drosophila melanogaster putative
potassium channel subunithomolog protein.
Length = 855
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -1
Query: 677 YSPHFGGLWEAGVKSIKFHM-----HRVLGNCNLTYEELITVLTQIEAILNSRPLTPLSS 513
+ H G +E K++K++ V+GN +Y++++ EA+L S+ P
Sbjct: 233 FQTHKGTSYECMFKNLKYNQAEKPTDNVMGN---SYDDMLDK----EALLGSKS-EPKGQ 284
Query: 512 DPDDMMPLTPGHFLIGQPL 456
DP+DM+ G+ L+ Q L
Sbjct: 285 DPNDMITSLGGNILLDQKL 303
>U36925-1|AAB50936.1| 855|Drosophila melanogaster seizure potassium
channel protein.
Length = 855
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -1
Query: 677 YSPHFGGLWEAGVKSIKFHM-----HRVLGNCNLTYEELITVLTQIEAILNSRPLTPLSS 513
+ H G +E K++K++ V+GN +Y++++ EA+L S+ P
Sbjct: 233 FQTHKGTSYECMFKNLKYNQAEKPTDNVMGN---SYDDMLDK----EALLGSKS-EPKGQ 284
Query: 512 DPDDMMPLTPGHFLIGQPL 456
DP+DM+ G+ L+ Q L
Sbjct: 285 DPNDMITSLGGNILLDQKL 303
>AY058350-1|AAL13579.1| 855|Drosophila melanogaster GH12235p
protein.
Length = 855
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -1
Query: 677 YSPHFGGLWEAGVKSIKFHM-----HRVLGNCNLTYEELITVLTQIEAILNSRPLTPLSS 513
+ H G +E K++K++ V+GN +Y++++ EA+L S+ P
Sbjct: 233 FQTHKGTSYECMFKNLKYNQAEKPTDNVMGN---SYDDMLDK----EALLGSKS-EPKGQ 284
Query: 512 DPDDMMPLTPGHFLIGQPL 456
DP+DM+ G+ L+ Q L
Sbjct: 285 DPNDMITSLGGNILLDQKL 303
>AE013599-3790|AAF47148.1| 855|Drosophila melanogaster CG3182-PB,
isoform B protein.
Length = 855
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -1
Query: 677 YSPHFGGLWEAGVKSIKFHM-----HRVLGNCNLTYEELITVLTQIEAILNSRPLTPLSS 513
+ H G +E K++K++ V+GN +Y++++ EA+L S+ P
Sbjct: 233 FQTHKGTSYECMFKNLKYNQAEKPTDNVMGN---SYDDMLDK----EALLGSKS-EPKGQ 284
Query: 512 DPDDMMPLTPGHFLIGQPL 456
DP+DM+ G+ L+ Q L
Sbjct: 285 DPNDMITSLGGNILLDQKL 303
>AE013599-3789|AAM68296.1| 855|Drosophila melanogaster CG3182-PA,
isoform A protein.
Length = 855
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -1
Query: 677 YSPHFGGLWEAGVKSIKFHM-----HRVLGNCNLTYEELITVLTQIEAILNSRPLTPLSS 513
+ H G +E K++K++ V+GN +Y++++ EA+L S+ P
Sbjct: 233 FQTHKGTSYECMFKNLKYNQAEKPTDNVMGN---SYDDMLDK----EALLGSKS-EPKGQ 284
Query: 512 DPDDMMPLTPGHFLIGQPL 456
DP+DM+ G+ L+ Q L
Sbjct: 285 DPNDMITSLGGNILLDQKL 303
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,803,156
Number of Sequences: 53049
Number of extensions: 769070
Number of successful extensions: 2009
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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