Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f14
         (840 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   5.0  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   6.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.7  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    23   8.7  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 317 YEMALKIM-KINASLFAMDLSVRPRPVNYWLQRSRFLSSFVP*LSCVICLLIYFVIVMF 144
           Y+M L I+  +   +F + +SV     N++ +R   +  F+P +  ++ L  Y V +MF
Sbjct: 532 YKMKLSIIFGVVHMIFGVCMSVVNH--NFFKKRISIVLEFLPQIIFLVLLFAYMVFMMF 588


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 239 NYWLQRSRFLSSFVP*LSCVICLLIYFVIVMFHFKY 132
           N++ +R   L  F+P +  ++ L  Y   +MF FK+
Sbjct: 546 NHFNRRVNILLEFIPQMMFLVLLFAYMCFMMF-FKW 580


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 317 YEMALKIMKINASLFAMDLSVRPRPVNYWLQRSRFLSSF 201
           Y+  L+I  +  +   + +   P  VNY+ +  +F+SSF
Sbjct: 856 YDGRLEIFLLQQNGEWVTVKAAPEKVNYFNEIDKFISSF 894


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 619 CGPCLWLTTVRGH-ADDTSQTRQRHDTTP 536
           CG  L L TVRG  A+ T++   R++  P
Sbjct: 11  CGAVLALVTVRGQAANPTTEAFGRNEIVP 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,906
Number of Sequences: 2352
Number of extensions: 18469
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)