Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10f14
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical p... 38 0.012
Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical p... 38 0.012
Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical pr... 38 0.012
X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carri... 38 0.012
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 37 0.021
Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical pr... 36 0.036
X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein... 36 0.036
CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical... 36 0.047
Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical pr... 35 0.063
U23412-3|AAK21466.1| 301|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 35 0.083
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 35 0.083
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 35 0.083
Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical p... 33 0.25
Z49068-11|CAN86909.1| 151|Caenorhabditis elegans Hypothetical p... 33 0.33
Z46787-1|CAA86739.2| 360|Caenorhabditis elegans Hypothetical pr... 33 0.33
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 32 0.58
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 31 1.3
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 31 1.3
AF125442-5|AAD12795.1| 314|Caenorhabditis elegans Serpentine re... 30 1.8
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z71259-11|CAI46575.1| 370|Caenorhabditis elegans Hypothetical p... 29 3.1
Z71259-10|CAA95794.4| 373|Caenorhabditis elegans Hypothetical p... 29 3.1
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81526-7|CAB04266.2| 330|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical p... 28 7.2
AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical... 28 7.2
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = -3
Query: 826 RLQARENAARGAE--GTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYAS 653
RLQAR + + + TM G F+ I+Q EG GLYRGITPNF+KVIPAVSISYVVYE
Sbjct: 464 RLQARAISPKNSTQPDTMVGQFKHILQTEGFTGLYRGITPNFMKVIPAVSISYVVYEKVR 523
Query: 652 RSLGVNMT 629
+ LG MT
Sbjct: 524 KQLGATMT 531
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 751 REGIRGLYRGITPNFIKVIPAVSISYVVYE 662
+EGI+ Y+G PN + +IP I VYE
Sbjct: 390 KEGIKCFYKGYLPNLLGIIPYAGIDLTVYE 419
>Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -3
Query: 820 QARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSL 644
+ R + GA T+RG I + EG+ G Y+G+ P +++ IP + + +E +L
Sbjct: 212 KVRIQTSPGAPPTLRGCAPMIYKAEGLTGFYKGLPPLWMRQIPYTMMKFACFEKTVEAL 270
>Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -3
Query: 820 QARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSL 644
+ R + GA T+RG I + EG+ G Y+G+ P +++ IP + + +E +L
Sbjct: 165 KVRIQTSPGAPPTLRGCAPMIYKAEGLTGFYKGLPPLWMRQIPYTMMKFACFEKTVEAL 223
>Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -3
Query: 820 QARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSL 644
+ R + GA T+RG I + EG+ G Y+G+ P +++ IP + + +E +L
Sbjct: 212 KVRIQTSPGAPPTLRGCAPMIYKAEGLTGFYKGLPPLWMRQIPYTMMKFACFEKTVEAL 270
>Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -3
Query: 820 QARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSL 644
+ R + GA T+RG I + EG+ G Y+G+ P +++ IP + + +E +L
Sbjct: 165 KVRIQTSPGAPPTLRGCAPMIYKAEGLTGFYKGLPPLWMRQIPYTMMKFACFEKTVEAL 223
>X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carrier
protein protein.
Length = 340
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -3
Query: 820 QARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSL 644
+ R + GA T+RG I + EG+ G Y+G+ P +++ IP + + +E +L
Sbjct: 165 KVRIQTSPGAPPTLRGCAPMIYKAEGLTGFYKGLPPLWMRQIPYTMMKFACFEKTVEAL 223
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -3
Query: 769 FREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEY 659
F+++V+ EG+ GLYRG+ P + V P +I + +Y
Sbjct: 419 FKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDY 455
>Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical
protein T09F3.2 protein.
Length = 384
Score = 35.9 bits (79), Expect = 0.036
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = -3
Query: 763 EIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASR 650
++++ EGI LY+G+ PN + V P+ ++ + Y + R
Sbjct: 154 QVIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKR 191
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 799 RGAEGTMRGVFREIVQ--REGIRGLYRGITPNFIKVIPAVSISYVVYEY 659
R G RG F+ + Q +EG +YRG++ ++ +P +I+ YE+
Sbjct: 328 REETGKSRGFFKTLYQLYKEGYPAMYRGLSVQLMRTVPNTAITMGTYEF 376
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEY 659
+ + + REG +G Y+G+T ++ V + I + +YEY
Sbjct: 244 MIKRVYHREGFKGFYKGVTASYAGVSETM-IQFCIYEY 280
>X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein
(c2) protein.
Length = 384
Score = 35.9 bits (79), Expect = 0.036
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = -3
Query: 763 EIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASR 650
++++ EGI LY+G+ PN + V P+ ++ + Y + R
Sbjct: 154 QVIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKR 191
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 799 RGAEGTMRGVFREIVQ--REGIRGLYRGITPNFIKVIPAVSISYVVYEY 659
R G RG F+ + Q +EG +YRG++ ++ +P +I+ YE+
Sbjct: 328 REETGKSRGFFKTLYQLYKEGYPAMYRGLSVQLMRTVPNTAITMGTYEF 376
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEY 659
+ + + REG +G Y+G+T ++ V + I + +YEY
Sbjct: 244 MIKRVYHREGFKGFYKGVTASYAGVSETM-IQFCIYEY 280
>CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical
protein C42C1.10 protein.
Length = 313
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -3
Query: 826 RLQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVY 665
RL A++ GTM V + I ++EGI G +RG P+ +++ P + + +Y
Sbjct: 146 RLVAQKAGHAVYTGTMHAV-KHIWEKEGIAGYFRGWVPSVVQIAPFTGMQFALY 198
>Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical
protein C14C10.1 protein.
Length = 334
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = -3
Query: 823 LQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
++ R + A TMR I ++EG+ G ++G+ P + + IP ++ +V +E
Sbjct: 156 VKVRMQTSSTAPKTMRECMPMIYKKEGMYGFFKGLPPLWTRQIPYTTVKFVCFE 209
>Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical
protein D1046.3 protein.
Length = 269
Score = 35.1 bits (77), Expect = 0.063
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSLGVNMT*SGCGP 611
+ +EI++ +GIRG YRG + IP I + ++E R++ C P
Sbjct: 128 ICKEIMETKGIRGFYRGYGSTVAREIPFSIIQFPIWEALKRAVANKKESGRCSP 181
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 766 REIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYA 656
+E+ G+RGLY G+ P + + + + YE A
Sbjct: 225 KEVYTSNGVRGLYSGVVPRVMWISGGGFVFFGAYETA 261
>U23412-3|AAK21466.1| 301|Caenorhabditis elegans Hypothetical
protein T10F2.2 protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 787 GTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
GT +V+ GIRGLY+G+ P ++ A +V YE
Sbjct: 250 GTFMSTLGAVVKENGIRGLYKGLLPTNLRTCFASGCLFVAYE 291
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
V R+I++ G+RG + G+TP + +P + YE
Sbjct: 162 VCRDIMKDTGVRGFFVGMTPTLAREVPGYFFFFGAYE 198
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.083
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 781 MRGVFREIVQREGIRGLYRGITPNFIKVIPA 689
+RGV RE+++ EG R L++G P ++ PA
Sbjct: 245 IRGVLREVLREEGPRALFKGFWPVMLRAFPA 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASR 650
V +++ ++ GI +YRG ++ IPA + VYEY +
Sbjct: 152 VVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKK 192
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.083
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 781 MRGVFREIVQREGIRGLYRGITPNFIKVIPA 689
+RGV RE+++ EG R L++G P ++ PA
Sbjct: 245 IRGVLREVLREEGPRALFKGFWPVMLRAFPA 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASR 650
V +++ ++ GI +YRG ++ IPA + VYEY +
Sbjct: 152 VVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKK 192
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.083
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 781 MRGVFREIVQREGIRGLYRGITPNFIKVIPA 689
+RGV RE+++ EG R L++G P ++ PA
Sbjct: 245 IRGVLREVLREEGPRALFKGFWPVMLRAFPA 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASR 650
V +++ ++ GI +YRG ++ IPA + VYEY +
Sbjct: 152 VVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKK 192
>Z79755-2|CAB02107.1| 294|Caenorhabditis elegans Hypothetical
protein F43G9.3 protein.
Length = 294
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 784 TMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
+++ VF + + GI+ LYRGI P + VIP S+ YE
Sbjct: 148 SLKHVFVKTYKEGGIQLLYRGIYPTILGVIPYAGSSFFTYE 188
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 760 IVQREGI-RGLYRGITPNFIKVIPAVSISYVVYEYASRSLG 641
I EG+ RGLY+G++ N++K AV +S+ YE +G
Sbjct: 250 IYHTEGLKRGLYKGLSMNWLKGPIAVGVSFTTYEKVLELVG 290
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 769 FREIVQRE-GIRGLYRGITPNFIKVIPAVSISYVVYEYASRSLGVN 635
F ++ RE G LYRG + +V+P S+ + +E + L V+
Sbjct: 58 FIKLTYRENGFFALYRGNSATMARVVPYASMQFAAFEQYKKLLKVD 103
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 826 RLQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRS 647
RLQ + GT F+ IVQ+EG RGLY+G++ + + +I + V+ R
Sbjct: 30 RLQTQSGPTPQYRGTFH-CFKLIVQKEGFRGLYKGMSSPLLSLSAINAIVFGVHGGTCRQ 88
Query: 646 L 644
+
Sbjct: 89 M 89
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 826 RLQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRS 647
RLQ + GT F+ IVQ+EG RGLY+G++ + + +I + V+ R
Sbjct: 30 RLQTQSGPTPQYRGTFH-CFKLIVQKEGFRGLYKGMSSPLLSLSAINAIVFGVHGGTCRQ 88
Query: 646 L 644
+
Sbjct: 89 M 89
>Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical
protein K01C8.7a protein.
Length = 296
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = -3
Query: 778 RGVFR---EIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSLGV 638
RGV++ + + EGI GL++G ++ +PA ++++ YE R +G+
Sbjct: 243 RGVWKTTLKTIHNEGIGGLWKGCLIANVRQLPAAVVTFLTYENVKRLVGM 292
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 826 RLQARENAA-RGAEGTMRGVFREIVQREGIRGLYRGITPNFI 704
R A E ++ R + R+IV+ EG+RGLY+G TP+ I
Sbjct: 35 RFSANEGSSLRPQYSSYADAVRKIVRVEGVRGLYQGWTPSLI 76
>Z49068-11|CAN86909.1| 151|Caenorhabditis elegans Hypothetical
protein K01C8.7b protein.
Length = 151
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 826 RLQARENAA-RGAEGTMRGVFREIVQREGIRGLYRGITPNFI 704
R A E ++ R + R+IV+ EG+RGLY+G TP+ I
Sbjct: 35 RFSANEGSSLRPQYSSYADAVRKIVRVEGVRGLYQGWTPSLI 76
>Z46787-1|CAA86739.2| 360|Caenorhabditis elegans Hypothetical
protein C16C10.1 protein.
Length = 360
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 763 EIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYAS 653
+I + EGIR L+ G++P + +PA + Y+ S
Sbjct: 115 KIARHEGIRSLWSGLSPTMVMALPATVFYFTTYDNLS 151
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEY 659
V +++ GI G+ P +KV P+ +I YEY
Sbjct: 314 VIKDMYHSRGISAFSSGLVPRLVKVSPSCAIMISFYEY 351
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 31.9 bits (69), Expect = 0.58
Identities = 10/37 (27%), Positives = 26/37 (70%)
Frame = -3
Query: 772 VFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
V+ ++++ EGI L++G TP ++++ P +++++ E
Sbjct: 251 VWGKVIKNEGIFALWKGFTPYYMRLGPHTVLTFIILE 287
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 799 RGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYEYASRSL 644
R G + + R I + EG+ L+RG TP ++ + + Y A ++L
Sbjct: 145 RNYTGVVNALTR-ITKEEGVLTLWRGCTPTVLRAMVVNAAQLATYSQAKQAL 195
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 823 LQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
++ R + A T+R I ++EG+ G ++G+ P + + IP + + +E
Sbjct: 170 VKVRMQTSPTAPTTLRACAPMIYKQEGLTGFFKGLPPLWTRQIPYTMMKFTCFE 223
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 787 GTMRGVFREIVQREGIRGLYRGITPNFI 704
G+M F+ + +G+RGL RG P FI
Sbjct: 85 GSMVQGFKVTIAEDGVRGLARGWAPTFI 112
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 823 LQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
++ R + A T+R I ++EG+ G ++G+ P + + IP + + +E
Sbjct: 170 VKVRMQTSPTAPTTLRACAPMIYKQEGLTGFFKGLPPLWTRQIPYTMMKFTCFE 223
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 787 GTMRGVFREIVQREGIRGLYRGITPNFI 704
G+M F+ + +G+RGL RG P FI
Sbjct: 85 GSMVQGFKVTIAEDGVRGLARGWAPTFI 112
>AF125442-5|AAD12795.1| 314|Caenorhabditis elegans Serpentine
receptor, class v protein22 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 221 SRFLSSFVP*LSCVICLLIYFVIVMF 144
+R LS FV +SCVIC++IY +IV F
Sbjct: 192 TRTLSVFVS-ISCVICIVIYGLIVKF 216
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -3
Query: 799 RGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYVVYE 662
R GTM+ + + + EG LY+G+ P +++ P ++ +VY+
Sbjct: 235 RKYSGTMQTISL-VYKEEGFGALYKGLLPKVMRLGPGGAVMLIVYD 279
>Z71259-11|CAI46575.1| 370|Caenorhabditis elegans Hypothetical
protein F13G3.7b protein.
Length = 370
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 835 SGXRLQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYV 671
S +LQ + N G MR F +I+++EGI LY+G F +P +S S++
Sbjct: 76 SRLQLQRQNNVYNG----MRDAFVKIIRQEGIGALYKG----FWMTLPQLSASFL 122
>Z71259-10|CAA95794.4| 373|Caenorhabditis elegans Hypothetical
protein F13G3.7a protein.
Length = 373
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -3
Query: 835 SGXRLQARENAARGAEGTMRGVFREIVQREGIRGLYRGITPNFIKVIPAVSISYV 671
S +LQ + N G MR F +I+++EGI LY+G F +P +S S++
Sbjct: 79 SRLQLQRQNNVYNG----MRDAFVKIIRQEGIGALYKG----FWMTLPQLSASFL 125
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 766 REIVQREGIRGLYRGITPNFIK 701
R+IV EG+RGLY+G N +
Sbjct: 267 RKIVHEEGVRGLYKGALANIFR 288
>Z81526-7|CAB04266.2| 330|Caenorhabditis elegans Hypothetical
protein F33H2.8 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 73 FILNVKLINITSVRFFFTYQYLK 141
F+L++KLI + +FFFT+ +LK
Sbjct: 62 FVLDIKLIATSFAQFFFTFIFLK 84
>Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 769 FREIVQREGIRGLYRGITPNFIKVIPAVSISYV 671
+ +I +REG RGLYRG F +P + S++
Sbjct: 84 YSDISKREGFRGLYRG----FWITVPQIGCSFI 112
>AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 769 FREIVQREGIRGLYRGITPNFIKVIPAVSISYV 671
+ +I +REG RGLYRG F +P + S++
Sbjct: 84 YSDISKREGFRGLYRG----FWITVPQIGCSFI 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,191,059
Number of Sequences: 27780
Number of extensions: 370330
Number of successful extensions: 1049
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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