Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10f09
(408 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 226 6e-60
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 222 1e-58
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 218 1e-57
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 216 6e-57
03_01_0034 + 318432-318825,318902-319851 75 2e-14
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 73 7e-14
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 73 7e-14
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 73 9e-14
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 73 9e-14
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 73 9e-14
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 73 1e-13
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 70 6e-13
05_07_0242 + 28615573-28616304 33 0.12
01_06_1014 - 33810112-33811995 31 0.27
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 0.81
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 1.4
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 1.9
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 28 2.5
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 28 3.3
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 28 3.3
10_08_0842 - 20954712-20957738 27 4.3
06_01_0500 + 3584743-3585516 27 4.3
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 27 4.3
01_01_1141 + 9052511-9052573,9052626-9052928 27 4.3
08_01_0496 + 4319646-4320371,4321007-4321045 27 5.7
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 27 5.7
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 27 5.7
05_03_0086 + 8279518-8280320,8280923-8281844 27 5.7
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488... 27 5.7
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 27 5.7
03_06_0203 - 32337928-32338025,32338745-32338820,32338905-323389... 27 5.7
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 27 5.7
01_05_0626 + 23797278-23797618,23797629-23798097 27 5.7
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 27 5.7
03_05_0141 - 21210176-21212140 27 7.6
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 226 bits (552), Expect = 6e-60
Identities = 100/113 (88%), Positives = 109/113 (96%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
KDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+A
Sbjct: 326 KDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVA 385
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 70
E ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 386 EVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 222 bits (542), Expect = 1e-58
Identities = 98/114 (85%), Positives = 109/114 (95%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
KDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVP GDLAKVQRAVCM+SN+T++
Sbjct: 326 KDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVV 385
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 67
E ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 386 EVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES 439
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 218 bits (533), Expect = 1e-57
Identities = 97/113 (85%), Positives = 108/113 (95%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
KDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN+T++
Sbjct: 326 KDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVV 385
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 70
E ++R+D KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 386 EVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGSE 438
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 216 bits (527), Expect = 6e-57
Identities = 95/113 (84%), Positives = 106/113 (93%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
KDVNAA+ +IKT+RT+QFVDWCPTGFK GINYQPPT VPGGDLAKV+RAVCM+SN TA+A
Sbjct: 407 KDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVA 466
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 70
E ++R+D KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 467 EVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 74.9 bits (176), Expect = 2e-14
Identities = 35/109 (32%), Positives = 62/109 (56%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQ 375
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 73.3 bits (172), Expect = 7e-14
Identities = 34/109 (31%), Positives = 61/109 (55%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLKMAATFVGNSTSIQ 375
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 73.3 bits (172), Expect = 7e-14
Identities = 34/109 (31%), Positives = 61/109 (55%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPN--------GLKMASTFIGNSTSIQ 375
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 72.9 bits (171), Expect = 9e-14
Identities = 34/109 (31%), Positives = 61/109 (55%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPI--------GLKMASTFIGNSTSIQ 375
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 72.9 bits (171), Expect = 9e-14
Identities = 34/109 (31%), Positives = 60/109 (55%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 345 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQ 396
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 72.9 bits (171), Expect = 9e-14
Identities = 34/109 (31%), Positives = 60/109 (55%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQ 375
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 72.5 bits (170), Expect = 1e-13
Identities = 34/109 (31%), Positives = 60/109 (55%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 504 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFVGNSTSIQ 555
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 556 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 70.1 bits (164), Expect = 6e-13
Identities = 33/109 (30%), Positives = 59/109 (54%)
Frame = -1
Query: 408 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 229
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 340 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPV--------GLSMASTFVGNSTSIQ 391
Query: 228 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 82
E + R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L +Y++
Sbjct: 392 EMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
>05_07_0242 + 28615573-28616304
Length = 243
Score = 32.7 bits (71), Expect = 0.12
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 39 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQGE 218
L +P P R P LL P + QP PH L PP+P+ T + T + +G
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGP 148
Query: 219 P 221
P
Sbjct: 149 P 149
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.27
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 186 AKRAFVHWYVGEGMEEGEFSEAREDL 109
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 0.81
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 48 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 176
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 108 PGPHGLRRTLPPPYPHRRTSARKH 179
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 42 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 188
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -2
Query: 182 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMKYLL 12
S+ GT V V R+ S + PS ++ + + +PL A ++EPK T+ + + L
Sbjct: 357 SMAGSAGTGVNVGRQRSP----QVTAPSPQVHEPPSISPLCAAIQEPKYTRDLLHAL 409
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 60 LQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWR 188
L R+ CR+ +P +P H L +P P+PH +A + A+R
Sbjct: 285 LLRAACRVRASPCL-RPLAHHLLDHIPRPHPHLLHAAARLAYR 326
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 58 AFSGVHADFFVILLEGSQVLTG 123
+F G ADFF +LL G+ VLTG
Sbjct: 88 SFRGRTADFFYMLLFGATVLTG 109
>10_08_0842 - 20954712-20957738
Length = 1008
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 392 PSLPSKPSVLSNSSTGVQPVSRSVSTT 312
PSLPS+P+ L S++ QP +R V T
Sbjct: 257 PSLPSRPAGLGASTSLSQPSARPVQQT 283
>06_01_0500 + 3584743-3585516
Length = 257
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 96 SRGQPGPHGLRRTLPPPYPHRRTSA 170
S+ P P +R PPP PHRR A
Sbjct: 9 SKKMPTPAVMRIRSPPPDPHRRARA 33
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 48 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHR 158
P P S R PS P P + PPP PHR
Sbjct: 21 PKPFKPLSSAAPFRRPSPPPPPPSPVPSPAPPPPPHR 57
>01_01_1141 + 9052511-9052573,9052626-9052928
Length = 121
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 51 HPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQG 215
H R+ L P G P PHG +R P R +A A ++ G +C G
Sbjct: 9 HCSAARAAVALPPLPLAGSPQPHGTKRRPVEPASRRLPAAAAPARQSTGGSCEVG 63
>08_01_0496 + 4319646-4320371,4321007-4321045
Length = 254
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 322 TDLETGWTPVDELDSTLGFDGSDGRV 399
T L+ W P+ + L FDG +GR+
Sbjct: 40 TALDAQWIPLPLIQRVLVFDGGEGRI 65
>07_03_1772 +
29411874-29413218,29413355-29413421,29413749-29413896,
29415293-29415416,29416340-29416590,29416923-29418449,
29418786-29418896,29419576-29419734,29419827-29421734
Length = 1879
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 154 TDVPVHESTLGVHEVELVVKASP 222
TD PV++ T+G H+++L+ A P
Sbjct: 226 TDDPVNKCTIGDHKLQLLTHAEP 248
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 318 NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA 217
N +PP G L V R VC + T +AEA A
Sbjct: 802 NRKPPPPPAQGRLCPVHRGVCSPATTFCLAEAGA 835
>05_03_0086 + 8279518-8280320,8280923-8281844
Length = 574
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 389 SLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEAT 282
S PSKPS S +P S T + PP PE T
Sbjct: 31 SAPSKPSPDKKSKPKNKPNHHSDKTANPPPQRPETT 66
>05_01_0558 -
4880811-4880996,4881098-4881178,4881247-4881393,
4881985-4882029,4882370-4883134
Length = 407
Score = 27.1 bits (57), Expect = 5.7
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 72 PCRLL--RNPSRGQP--GPHGLRR-TLPPPYPHRRTSARKHAWRT*GRT 203
P R L RNPS P PH L + PPP PHR T R H+ + RT
Sbjct: 19 PARRLPRRNPSLPFPLRPPHRLSPFSAPPPEPHRLT-YRTHSTSSSSRT 66
>04_04_1079 -
30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 99 RGQPGPHGLRRTLPPPYPHRRTSARK 176
RG+P R P P P RRT AR+
Sbjct: 885 RGRPSSSASRTAKPAPRPVRRTRARR 910
>03_06_0203 -
32337928-32338025,32338745-32338820,32338905-32338971,
32339181-32339275,32340062-32340151,32340293-32340340,
32340764-32341069
Length = 259
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Frame = +3
Query: 27 WLS-TLRLPHPRLQRSPCRLL------RNPSRGQPGPHGLRRTLP-PPYPH 155
WL T R PRL SP +L + P + QPG R LP PP PH
Sbjct: 39 WLKPTRRELCPRLVSSPAKLTDDATPPQPPPQPQPGDRRRRPRLPDPPRPH 89
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 93 PSRGQPGPHGLRRTLPPPYPHRRTSAR 173
P R P P +++ PPP P + T AR
Sbjct: 370 PPRPPPPPPPIKKGAPPPAPPKATMAR 396
>01_05_0626 + 23797278-23797618,23797629-23798097
Length = 269
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 185 PSVLSCTGTSVRVWRRESSPKPVRTW 108
P ++ GT+V VW R+ K V W
Sbjct: 218 PCIVCVVGTTVSVWMRKFDEKGVERW 243
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 93 PSRGQPGPHGLRRTLPPPYPHRRTSARKHAW 185
P+ G P PH PPP+P H W
Sbjct: 322 PTIGFPPPHAAAMVPPPPHPPPFCRPPLHVW 352
>03_05_0141 - 21210176-21212140
Length = 654
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 39 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 176
L LP P PC R+P P T PP HRRT++ +
Sbjct: 3 LLLPPPPTPTPPCAS-RDPLHAAPRRSRSPSTSRPPSRHRRTASAR 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,763,722
Number of Sequences: 37544
Number of extensions: 267219
Number of successful extensions: 1255
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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