Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f07
         (869 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022529-1|AAY54945.1|  255|Drosophila melanogaster IP06473p pro...   116   4e-26
AE014296-2036|AAF50005.2|  255|Drosophila melanogaster CG14130-P...   116   4e-26
AY071524-1|AAL49146.1|  160|Drosophila melanogaster RE57135p pro...    36   0.055
AE014298-248|AAF45660.2|  160|Drosophila melanogaster CG14798-PA...    36   0.055
AE014298-247|AAN09055.1|  237|Drosophila melanogaster CG14798-PB...    36   0.055
AY058549-1|AAL13778.1|  738|Drosophila melanogaster LD24661p pro...    30   3.6  
AE013599-2731|AAF57664.2|  738|Drosophila melanogaster CG5341-PA...    30   3.6  

>BT022529-1|AAY54945.1|  255|Drosophila melanogaster IP06473p
           protein.
          Length = 255

 Score =  116 bits (279), Expect = 4e-26
 Identities = 49/83 (59%), Positives = 65/83 (78%)
 Frame = -2

Query: 868 RYEFDHWDDAIQGFRETERSQFKPENQVILDRVXALAFTTDTLPHVHVLDLAAAGFIKPH 689
           RYEFDHWDDAI GFRETER ++ P+N+ IL+RV  +AF    +P+VH+LDLA  G IKPH
Sbjct: 77  RYEFDHWDDAIHGFRETERKKWFPKNREILERVRQVAFDGAVMPYVHILDLAPDGVIKPH 136

Query: 688 IDAVRFCGDVIAGVCLCSSAVMR 620
           +D+ R+CG+ I+G+ L S +VMR
Sbjct: 137 VDSTRYCGNTISGISLLSDSVMR 159



 Score = 31.5 bits (68), Expect = 1.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 559 YVMKGVARYEFTHAVLGGERSQW 491
           Y+M   ARY+FTH +L  E SQ+
Sbjct: 214 YIMSHTARYKFTHEILAKEHSQF 236


>AE014296-2036|AAF50005.2|  255|Drosophila melanogaster CG14130-PA
           protein.
          Length = 255

 Score =  116 bits (279), Expect = 4e-26
 Identities = 49/83 (59%), Positives = 65/83 (78%)
 Frame = -2

Query: 868 RYEFDHWDDAIQGFRETERSQFKPENQVILDRVXALAFTTDTLPHVHVLDLAAAGFIKPH 689
           RYEFDHWDDAI GFRETER ++ P+N+ IL+RV  +AF    +P+VH+LDLA  G IKPH
Sbjct: 77  RYEFDHWDDAIHGFRETERKKWFPKNREILERVRQVAFDGAVMPYVHILDLAPDGVIKPH 136

Query: 688 IDAVRFCGDVIAGVCLCSSAVMR 620
           +D+ R+CG+ I+G+ L S +VMR
Sbjct: 137 VDSTRYCGNTISGISLLSDSVMR 159



 Score = 31.5 bits (68), Expect = 1.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 559 YVMKGVARYEFTHAVLGGERSQW 491
           Y+M   ARY+FTH +L  E SQ+
Sbjct: 214 YIMSHTARYKFTHEILAKEHSQF 236


>AY071524-1|AAL49146.1|  160|Drosophila melanogaster RE57135p
           protein.
          Length = 160

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -3

Query: 816 NAASSSQRTKSYWTAXKR*PSQPTHYRTCTSWTWPPLGS*SRILTLSD 673
           NA S   +T+  W   +  PS      +CTSWTW  L   SR  T  D
Sbjct: 10  NAESGLPKTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 57


>AE014298-248|AAF45660.2|  160|Drosophila melanogaster CG14798-PA,
           isoform A protein.
          Length = 160

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -3

Query: 816 NAASSSQRTKSYWTAXKR*PSQPTHYRTCTSWTWPPLGS*SRILTLSD 673
           NA S   +T+  W   +  PS      +CTSWTW  L   SR  T  D
Sbjct: 10  NAESGLPKTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 57


>AE014298-247|AAN09055.1|  237|Drosophila melanogaster CG14798-PB,
           isoform B protein.
          Length = 237

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -3

Query: 816 NAASSSQRTKSYWTAXKR*PSQPTHYRTCTSWTWPPLGS*SRILTLSD 673
           NA S   +T+  W   +  PS      +CTSWTW  L   SR  T  D
Sbjct: 87  NAESGLPKTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 134


>AY058549-1|AAL13778.1|  738|Drosophila melanogaster LD24661p
           protein.
          Length = 738

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 209 SLHPVRKKPTKIIILVHYLRT*LKNLYFKNEQQKTLGY*P 328
           +L+ +RKKPT I+  +  +    KN  F  +QQK  G+ P
Sbjct: 200 TLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLP 239


>AE013599-2731|AAF57664.2|  738|Drosophila melanogaster CG5341-PA
           protein.
          Length = 738

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 209 SLHPVRKKPTKIIILVHYLRT*LKNLYFKNEQQKTLGY*P 328
           +L+ +RKKPT I+  +  +    KN  F  +QQK  G+ P
Sbjct: 200 TLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLP 239


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,621,696
Number of Sequences: 53049
Number of extensions: 508362
Number of successful extensions: 1051
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)