Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10f05
(357 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain 4... 38 0.039
UniRef50_Q3IBS4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.27
UniRef50_A6QT95 Cluster: Predicted protein; n=1; Ajellomyces cap... 36 0.27
UniRef50_Q6BK86 Cluster: Debaryomyces hansenii chromosome F of s... 35 0.48
UniRef50_A3J7U0 Cluster: Multicopper oxidase family protein; n=2... 34 0.83
UniRef50_A4HLY6 Cluster: Putative uncharacterized protein; n=2; ... 33 1.1
UniRef50_P58959 Cluster: Putative gustatory receptor 39a, isofor... 33 1.9
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 32 2.5
UniRef50_Q0UND6 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 2.5
UniRef50_A7PPT7 Cluster: Chromosome chr18 scaffold_24, whole gen... 32 3.4
UniRef50_Q2C0X4 Cluster: Usher protein; n=1; Photobacterium sp. ... 31 5.9
UniRef50_Q7RJL1 Cluster: Putative uncharacterized protein PY0324... 31 5.9
UniRef50_A4SIQ6 Cluster: Glycosyl transferase, family 2; n=5; Ga... 31 7.7
>UniRef50_A2Q588 Cluster: NADH-ubiquinone oxidoreductase, chain
49kDa; Respiratory-chain NADH dehydrogenase, subunit 1;
n=2; core eudicotyledons|Rep: NADH-ubiquinone
oxidoreductase, chain 49kDa; Respiratory-chain NADH
dehydrogenase, subunit 1 - Medicago truncatula (Barrel
medic)
Length = 288
Score = 38.3 bits (85), Expect = 0.039
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = -3
Query: 304 YLATQNIAAMTSYTPEDMNNIETPKE-KCSIELGFVQQDYNEWNANTALWMLVYAVLFWI 128
YLAT A+T PE + NI+ PK K + + + QD N ++ + + VY +L WI
Sbjct: 72 YLATMFTEAITVNGPEQLGNIQVPKRMKLADIITILVQDINYFSGLES-FKEVYGIL-WI 129
Query: 127 LTYVMVLTVAVCFDV 83
L +++L + + V
Sbjct: 130 LVPILILVLGITISV 144
>UniRef50_Q3IBS4 Cluster: Putative uncharacterized protein; n=1;
uncultured sulfate-reducing bacterium|Rep: Putative
uncharacterized protein - uncultured sulfate-reducing
bacterium
Length = 199
Score = 35.5 bits (78), Expect = 0.27
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +3
Query: 9 PLIQNNLQICCDHLTIPMLVTER--KPTSKHTATVKTITYVKIQNK 140
PL++N+L + CDH T P+ + R KP S H A +T ++ +++
Sbjct: 154 PLLENDLAVWCDHSTPPISQSRRSNKPASGHAARDRTAPFMATKDE 199
>UniRef50_A6QT95 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 170
Score = 35.5 bits (78), Expect = 0.27
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 55 YPCLLRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSP 195
YP L E+RRRS +K LK + K+H P S E + R+ P
Sbjct: 2 YPSLKPQETRRRSETRTVKKDKALKEKYKKHPPWSAEDWQRAKAAPP 48
>UniRef50_Q6BK86 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=6;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 537
Score = 34.7 bits (76), Expect = 0.48
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 253 MNNIETPKEKCSIELGFVQQDYNEWNANTALWMLVYAVLFWILTYVMV---LTVAVCFDV 83
+N ++ +E C EL ++ +Y LW Y LF++L+ +++ +TV +C D
Sbjct: 221 VNEVDFDEEYCDDELEILKNNYELSVHELILWQNRYYFLFFVLSTLVIPVAITVIICKDT 280
Query: 82 GFRSVTSMGIVK 47
+ GI++
Sbjct: 281 WVNGILYPGILR 292
>UniRef50_A3J7U0 Cluster: Multicopper oxidase family protein; n=2;
Marinobacter|Rep: Multicopper oxidase family protein -
Marinobacter sp. ELB17
Length = 528
Score = 33.9 bits (74), Expect = 0.83
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +1
Query: 103 RLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVFRCCSYLQEYKMSLL 282
RL+ ++ I+ H+P +T +W +H P Q + I R +L + + L
Sbjct: 103 RLRRGQHVRVHIENHLPEATTVHWHGLHVPPEVDGQPRFPIQPGATRTVGFLVDDRAGLY 162
Query: 283 LYFV*PN 303
Y P+
Sbjct: 163 WYHPHPH 169
>UniRef50_A4HLY6 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 1107
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 61 CLLRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIH-CSP 195
C+LR+ +R R + P H + + +P YWR++H C P
Sbjct: 862 CVLRNATRCRMRASQCYPGHAMHRYLAYALPFRRYVYWRAVHLCEP 907
>UniRef50_P58959 Cluster: Putative gustatory receptor 39a, isoform
A; n=1; Drosophila melanogaster|Rep: Putative gustatory
receptor 39a, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 371
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = -3
Query: 166 ALWMLVYAVLFWILTYVMVLTVAVCFDVGFRSVTSMGIVKWSQQICKLFCISGAK 2
AL MLVY F +VL + + F V + V + G++ ++QQ+C+ ISG +
Sbjct: 161 ALCMLVYIFAF------LVLCLLLMFFVSLKQVMTAGLIHYNQQLCQGDLISGLR 209
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_00070730;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00070730 - Tetrahymena thermophila SB210
Length = 5422
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 292 QNIAAMTSYTPEDMNNIETPKEKCSIELGFVQQDYNEWNANTA 164
QN+A + YT E + + TP K L F+ + EWN +TA
Sbjct: 3680 QNLAILCDYTLEQ-SVLNTPLNKIITGLQFIAEKVEEWNLSTA 3721
>UniRef50_Q0UND6 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 114
Score = 32.3 bits (70), Expect = 2.5
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 79 SRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQ 210
+RR S +PR P H L+SR+ P T P R+ +P++ SQ
Sbjct: 70 ARRSSPEPRRTPEHLLRSRLIFQQPAPT-PSRRATTVAPLQSSQ 112
>UniRef50_A7PPT7 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 74
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 167 GSVDVGICCFILDFNVCDGFNRGCVLRRRLSLRNKH 60
G++ + I FILD N+C+G VL RR +L KH
Sbjct: 36 GNLGLSILMFILDENLCEGLVSTIVLVRRHALVMKH 71
>UniRef50_Q2C0X4 Cluster: Usher protein; n=1; Photobacterium sp.
SKA34|Rep: Usher protein - Photobacterium sp. SKA34
Length = 792
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 313 YLIYLATQNIAAMTSYTPEDMNNIETPKEKCSIELGFVQQDYNE 182
Y+ ++ATQ + T +P NI+T C +++ ++ D NE
Sbjct: 742 YVGFIATQGVLMATLDSPSHHLNIKTNDHICKVDISKIKPDLNE 785
>UniRef50_Q7RJL1 Cluster: Putative uncharacterized protein PY03248;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY03248 - Plasmodium yoelii
yoelii
Length = 760
Score = 31.1 bits (67), Expect = 5.9
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = -2
Query: 323 KFNLFNLFGYTKYSSNDILYS*RYEQHRNTEREMLHRAWLCSTGLQ*MERQYGSVDVGIC 144
K+N+FNL+G Y + + RY ++ N + + C+ + M+ Y D IC
Sbjct: 546 KYNIFNLYGKYSYVCKRGILNKRYRKNDNNNNDYY---YYCTKKREDMKYIYNEWDEHIC 602
Query: 143 CFILDF 126
+L++
Sbjct: 603 VELLEY 608
>UniRef50_A4SIQ6 Cluster: Glycosyl transferase, family 2; n=5;
Gammaproteobacteria|Rep: Glycosyl transferase, family 2
- Aeromonas salmonicida (strain A449)
Length = 416
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -3
Query: 223 CSIELG---FVQQDYNEWNANTALWMLVYAVLFWILTYVMVLTVAV 95
C ++ G F+ Y++ A + +W + Y +++W+L V V+ VAV
Sbjct: 345 CLLQFGVSIFIDNHYDKTMARSFVWCIWYPLIYWLLNLVTVI-VAV 389
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,651,208
Number of Sequences: 1657284
Number of extensions: 6870292
Number of successful extensions: 21805
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21801
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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