Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f05
         (357 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   2.6  
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    23   3.4  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   4.5  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    22   7.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   7.9  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    22   7.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   7.9  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    22   7.9  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            22   7.9  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    22   7.9  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -3

Query: 322 NLTYLIYLATQNIAAMTSYTPEDMNNIETPKEKCSIEL---GFVQQDYNEWNANTAL 161
           N  ++  +  Q +A    +    ++++  P ++  +EL   G  + D N+W ANT L
Sbjct: 702 NYRFMRGIEQQFLALSKGFGELILSHLLRPFDERELELLISGISKIDVNDWKANTRL 758


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 310 LIYLATQNIAAMTSYTPED 254
           LIYLA Q   A T+Y P D
Sbjct: 69  LIYLAEQYAPAGTTYYPPD 87


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 211 LGFVQQDYNEWNANTALWMLVY 146
           LG+V  D    N+ T LW++ +
Sbjct: 206 LGYVGSDMTSRNSCTQLWLITH 227


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 217 IELGFVQQDYNEWNANTAL 161
           ++LGF+QQ Y E  A + L
Sbjct: 370 VKLGFLQQGYEEMIAASRL 388


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +2

Query: 215 YGAFLFRCFDVVHIFRSIRCHCCYILCSQ 301
           Y     +C   +H+   +RC  C   C Q
Sbjct: 335 YDRLCQQCHKALHLDIGLRCVVCDFTCHQ 363


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 209 WLCSTGLQ*MERQYGSVDV 153
           W   TGLQ ++  YGS+ V
Sbjct: 285 WHAHTGLQKLDGLYGSIVV 303


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 209 WLCSTGLQ*MERQYGSVDV 153
           W   TGLQ ++  YGS+ V
Sbjct: 285 WHAHTGLQKLDGLYGSIVV 303


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 44  PLDNTHACYGAKADVEAH 97
           P  +TH  YG+ A++  H
Sbjct: 368 PQPHTHPSYGSPAEIPKH 385


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 217 IELGFVQQDYNEWNANTAL 161
           ++LGF+QQ Y E  A + L
Sbjct: 370 VKLGFLQQGYEEMIAASRL 388


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 115 SHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALW 219
           S+T  S   +++PTS + Y   +    V+ S  LW
Sbjct: 25  SYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLW 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,316
Number of Sequences: 2352
Number of extensions: 8460
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)