Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10f05
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK024384-1|BAB14903.1| 924|Homo sapiens protein ( Homo sapiens ... 31 0.79
BC024298-1|AAH24298.1| 1359|Homo sapiens RAD54-like 2 (S. cerevi... 30 1.8
BC001474-1|AAH01474.2| 1159|Homo sapiens RAD54L2 protein protein. 30 1.8
AB018352-1|BAA34529.2| 1385|Homo sapiens KIAA0809 protein protein. 30 1.8
BC020956-1|AAH20956.1| 924|Homo sapiens SETD5 protein protein. 29 3.2
AK025478-1|BAB15144.1| 603|Homo sapiens protein ( Homo sapiens ... 29 3.2
AK001569-1|BAA91762.1| 924|Homo sapiens protein ( Homo sapiens ... 29 3.2
AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein. 29 3.2
BC150291-1|AAI50292.1| 1731|Homo sapiens Unknown (protein for IM... 28 9.8
BC066974-1|AAH66974.1| 419|Homo sapiens EP400NL protein protein. 28 9.8
BC064554-1|AAH64554.1| 826|Homo sapiens EP400 protein protein. 28 9.8
BC037208-1|AAH37208.1| 985|Homo sapiens EP400 protein protein. 28 9.8
AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related ... 28 9.8
AK126212-1|BAC86487.1| 488|Homo sapiens protein ( Homo sapiens ... 28 9.8
AK097720-1|BAC05150.1| 345|Homo sapiens protein ( Homo sapiens ... 28 9.8
AK096311-1|BAC04759.1| 824|Homo sapiens protein ( Homo sapiens ... 28 9.8
AK091234-1|BAC03617.1| 430|Homo sapiens protein ( Homo sapiens ... 28 9.8
AB040931-1|BAA96022.1| 1731|Homo sapiens KIAA1498 protein protein. 28 9.8
>AK024384-1|BAB14903.1| 924|Homo sapiens protein ( Homo sapiens
cDNA FLJ14322 fis, clone PLACE4000063, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 924
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 67 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 240
++ S R S+ P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 597 VQGSSARTSSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 655
Query: 241 R 243
R
Sbjct: 656 R 656
>BC024298-1|AAH24298.1| 1359|Homo sapiens RAD54-like 2 (S. cerevisiae)
protein.
Length = 1359
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 52 QYPCL-LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSIS 228
++P L LR R+ +T P + S +SR K H+P +PY H PV A+ +S
Sbjct: 1137 RHPVLDLRGHKRKLATPPAAQESSRRRSR-KGHLPAPVQPY---EHGYPVSGGFAMPPVS 1192
Query: 229 LS 234
L+
Sbjct: 1193 LN 1194
>BC001474-1|AAH01474.2| 1159|Homo sapiens RAD54L2 protein protein.
Length = 1159
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 52 QYPCL-LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSIS 228
++P L LR R+ +T P + S +SR K H+P +PY H PV A+ +S
Sbjct: 937 RHPVLDLRGHKRKLATPPAAQESSRRRSR-KGHLPAPVQPY---EHGYPVSGGFAMPPVS 992
Query: 229 LS 234
L+
Sbjct: 993 LN 994
>AB018352-1|BAA34529.2| 1385|Homo sapiens KIAA0809 protein protein.
Length = 1385
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 52 QYPCL-LRSESRRRSTQPRLKPSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSIS 228
++P L LR R+ +T P + S +SR K H+P +PY H PV A+ +S
Sbjct: 1163 RHPVLDLRGHKRKLATPPAAQESSRRRSR-KGHLPAPVQPY---EHGYPVSGGFAMPPVS 1218
Query: 229 LS 234
L+
Sbjct: 1219 LN 1220
>BC020956-1|AAH20956.1| 924|Homo sapiens SETD5 protein protein.
Length = 924
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 67 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 240
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 597 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 655
Query: 241 R 243
R
Sbjct: 656 R 656
>AK025478-1|BAB15144.1| 603|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21825 fis, clone HEP01348. ).
Length = 603
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 67 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 240
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 276 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 334
Query: 241 R 243
R
Sbjct: 335 R 335
>AK001569-1|BAA91762.1| 924|Homo sapiens protein ( Homo sapiens
cDNA FLJ10707 fis, clone NT2RP3000859. ).
Length = 924
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 67 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 240
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 597 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 655
Query: 241 R 243
R
Sbjct: 656 R 656
>AB051544-1|BAB21848.1| 1409|Homo sapiens KIAA1757 protein protein.
Length = 1409
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 67 LRSESRRRSTQPRLK--PSHTLKSRIKQHIPTSTEPYWRSIHCSPVEQSQALWSISLSVF 240
++ S R + P K PSH+ S ++ P+ + S HC P E + W + SV
Sbjct: 1082 VQGSSARTPSSPHKKFSPSHSSMSHLEAVSPSDSRGT-SSSHCRPQENISSRWMVPTSVE 1140
Query: 241 R 243
R
Sbjct: 1141 R 1141
>BC150291-1|AAI50292.1| 1731|Homo sapiens Unknown (protein for
IMAGE:8860133) protein.
Length = 1731
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 201 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 244
>BC066974-1|AAH66974.1| 419|Homo sapiens EP400NL protein protein.
Length = 419
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 121 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 164
>BC064554-1|AAH64554.1| 826|Homo sapiens EP400 protein protein.
Length = 826
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 201 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 244
>BC037208-1|AAH37208.1| 985|Homo sapiens EP400 protein protein.
Length = 985
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 201 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 244
>AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related
protein protein.
Length = 3124
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 201 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 244
>AK126212-1|BAC86487.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ44224 fis, clone THYMU3006132. ).
Length = 488
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 190 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 233
>AK097720-1|BAC05150.1| 345|Homo sapiens protein ( Homo sapiens
cDNA FLJ40401 fis, clone TESTI2037106. ).
Length = 345
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 58 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 101
>AK096311-1|BAC04759.1| 824|Homo sapiens protein ( Homo sapiens
cDNA FLJ38992 fis, clone NT2RI2009173. ).
Length = 824
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 201 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 244
>AK091234-1|BAC03617.1| 430|Homo sapiens protein ( Homo sapiens
cDNA FLJ33915 fis, clone CTONG2016658. ).
Length = 430
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 122 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 165
>AB040931-1|BAA96022.1| 1731|Homo sapiens KIAA1498 protein protein.
Length = 1731
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 15 IQNNLQICCDHLTIPMLVTERKPTSKHTATVKTITYVKIQNKTA 146
I Q+ H P+ V ER+P+ HT + TI ++ Q+ A
Sbjct: 202 IAQGAQVQLQHPGTPITVRERRPSQPHTQSGGTIHHLGPQSPAA 245
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,752,277
Number of Sequences: 237096
Number of extensions: 1014953
Number of successful extensions: 6804
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6804
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -