Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f04
         (790 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.    58   5e-08
BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase pro...    57   8e-08
BC007267-1|AAH07267.1|  930|Homo sapiens Unknown (protein for IM...    57   8e-08
AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase pro...    57   8e-08
AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein pr...    57   8e-08
U26644-1|AAC50259.1| 2504|Homo sapiens fas protein.                    56   2e-07

>U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.
          Length = 2509

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 39/97 (40%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = +1

Query: 307  VCRWRSRGVQVLVSRTDSSTXXXXXXXXXXXXXXXXXXXXFNLAAVLRDAFLDKQTPADF 486
            V RWR++GVQV VS ++ S+                    FNLA VLRD  L+ QTP  F
Sbjct: 1927 VRRWRAQGVQVQVSTSNISSLEGARGLIAEAAQLGPVGGVFNLAVVLRDGLLENQTPEFF 1986

Query: 487  QTVAKPKIDGQLH-DRPLFRWVDEL----IAHLVSCG 582
            Q V KPK  G L+ DR       EL    +   VSCG
Sbjct: 1987 QDVCKPKYSGTLNLDRVTREACPELDYFVVFSSVSCG 2023


>BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase protein.
          Length = 2511

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 39/97 (40%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = +1

Query: 307  VCRWRSRGVQVLVSRTDSSTXXXXXXXXXXXXXXXXXXXXFNLAAVLRDAFLDKQTPADF 486
            V RWR +GVQV VS ++ S+                    FNLA VLRD  L+ QTP  F
Sbjct: 1929 VRRWRRQGVQVQVSTSNISSLEGARGLIAEAAQLGPVGGVFNLAVVLRDGLLENQTPEFF 1988

Query: 487  QTVAKPKIDGQLH-DRPLFRWVDEL----IAHLVSCG 582
            Q V KPK  G L+ DR       EL    +   VSCG
Sbjct: 1989 QDVCKPKYSGTLNLDRVTREACPELDYFVVFSSVSCG 2025


>BC007267-1|AAH07267.1|  930|Homo sapiens Unknown (protein for
           IMAGE:3138929) protein.
          Length = 930

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 39/97 (40%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = +1

Query: 307 VCRWRSRGVQVLVSRTDSSTXXXXXXXXXXXXXXXXXXXXFNLAAVLRDAFLDKQTPADF 486
           V RWR +GVQV VS ++ S+                    FNLA VLRD  L+ QTP  F
Sbjct: 348 VRRWRRQGVQVQVSTSNISSLEGARGLIAEAAQLGPVGGVFNLAVVLRDGLLENQTPEFF 407

Query: 487 QTVAKPKIDGQLH-DRPLFRWVDEL----IAHLVSCG 582
           Q V KPK  G L+ DR       EL    +   VSCG
Sbjct: 408 QDVCKPKYSGTLNLDRVTREACPELDYFVVFSSVSCG 444


>AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase protein.
          Length = 2511

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 39/97 (40%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = +1

Query: 307  VCRWRSRGVQVLVSRTDSSTXXXXXXXXXXXXXXXXXXXXFNLAAVLRDAFLDKQTPADF 486
            V RWR +GVQV VS ++ S+                    FNLA VLRD  L+ QTP  F
Sbjct: 1929 VRRWRRQGVQVQVSTSNISSLEGARGLIAEAAQLGPVGGVFNLAVVLRDGLLENQTPEFF 1988

Query: 487  QTVAKPKIDGQLH-DRPLFRWVDEL----IAHLVSCG 582
            Q V KPK  G L+ DR       EL    +   VSCG
Sbjct: 1989 QDVCKPKYSGTLNLDRVTREACPELDYFVVFSSVSCG 2025


>AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein
            protein.
          Length = 2548

 Score = 56.8 bits (131), Expect = 8e-08
 Identities = 39/97 (40%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = +1

Query: 307  VCRWRSRGVQVLVSRTDSSTXXXXXXXXXXXXXXXXXXXXFNLAAVLRDAFLDKQTPADF 486
            V RWR +GVQV VS ++ S+                    FNLA VLRD  L+ QTP  F
Sbjct: 1966 VRRWRRQGVQVQVSTSNISSLEGARGLIAEAAQLGPVGGVFNLAVVLRDGLLENQTPEFF 2025

Query: 487  QTVAKPKIDGQLH-DRPLFRWVDEL----IAHLVSCG 582
            Q V KPK  G L+ DR       EL    +   VSCG
Sbjct: 2026 QDVCKPKYSGTLNLDRVTREACPELDYFVVFSSVSCG 2062


>U26644-1|AAC50259.1| 2504|Homo sapiens fas protein.
          Length = 2504

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 38/97 (39%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
 Frame = +1

Query: 307  VCRWRSRGVQVLVSRTDSSTXXXXXXXXXXXXXXXXXXXXFNLAAVLRDAFLDKQTPADF 486
            V RWR +G+QV VS ++ S+                    FNLA VLRD  L+ QTP  F
Sbjct: 1923 VRRWRRQGLQVQVSTSNISSLEGARGLIAEAAQLGPVGGVFNLAVVLRDGLLENQTPEFF 1982

Query: 487  QTVAKPKIDGQLH-DRPLFRWVDEL----IAHLVSCG 582
            Q V KPK  G L+ DR       EL    +   VSCG
Sbjct: 1983 QDVCKPKYSGTLNLDRVTREACPELDYFVVFSSVSCG 2019


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,260,018
Number of Sequences: 237096
Number of extensions: 1391512
Number of successful extensions: 10145
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10139
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)