Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f03
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   3.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   3.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   6.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 326 FFEANILSINNNTYELIAKHCWA 394
           F+ ANI S++ +T++ I +  W+
Sbjct: 310 FYVANIFSLDLDTFKKIMQKAWS 332


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 139 ILFQRLSFYEETCLALLALQDKLPKSFV*ILH 234
           ILF   ++ E T +  L  +DKL + F  ++H
Sbjct: 81  ILFADFAYLETTWICTLLKKDKLLELFKRLIH 112


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 139 ILFQRLSFYEETCLALLALQDKLPKSFV*ILH 234
           ILF   ++ E T +  L  +DKL + F  ++H
Sbjct: 99  ILFADFAYLETTWICTLLKKDKLLELFKRLIH 130


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 670 YDGGEIHKDVALIYTEKYNNTVVSKIKLGNYT 575
           Y  G+I + +A + +EK  N ++ K    +YT
Sbjct: 241 YRFGQITRRIAAVASEKIKNEIIWKKLREDYT 272


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 46  NNLSNQSEDNQTITNAEETDKGVGIGNIVRQILFQ 150
           +N   Q   + T++ +E +  G G GN+  QI  Q
Sbjct: 79  HNDGTQLMPSPTVSGSEMSSPGAGSGNLSPQIQTQ 113


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 46  NNLSNQSEDNQTITNAEETDKGVGIGNIVRQILFQ 150
           +N   Q   + T++ +E +  G G GN+  QI  Q
Sbjct: 79  HNDGTQLMPSPTVSGSEMSSPGAGSGNLSPQIQTQ 113


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 415 WELWYRYSQGNLLC 456
           W++ YR+  G LLC
Sbjct: 100 WDITYRFYGGFLLC 113


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 130 VRQILFQRLSFYEETC 177
           +RQI  Q L  YE+ C
Sbjct: 154 IRQIYHQELEKYEQAC 169


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 483 SSPTYCSSLISPTSTFSP*PKASKSVIDFL 572
           SSP   +S +SP S  S    A   ++D L
Sbjct: 156 SSPAETASSLSPQSVASTASSADHQIVDRL 185


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 483 SSPTYCSSLISPTSTFSP*PKASKSVIDFL 572
           SSP   +S +SP S  S    A   ++D L
Sbjct: 147 SSPAETASSLSPQSVASTASSADHQIVDRL 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,419
Number of Sequences: 336
Number of extensions: 4199
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)