Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10f03
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M28879-1|AAA75490.1| 247|Homo sapiens protein ( Human granzyme ... 38 0.032
J03189-1|AAA36603.1| 247|Homo sapiens protein ( Human proteolyt... 38 0.032
M38193-1|AAA67124.1| 247|Homo sapiens cytotoxic T-lymphocyte-as... 38 0.056
M17016-1|AAA36627.1| 247|Homo sapiens protein ( Human serine pr... 38 0.056
BC030195-1|AAH30195.1| 247|Homo sapiens granzyme B (granzyme 2,... 38 0.056
AY372494-1|AAR23323.1| 281|Homo sapiens endogenous granzyme B p... 38 0.056
AY232654-1|AAP70244.1| 235|Homo sapiens granzyme B variant prot... 38 0.056
J04071-1|AAA52118.1| 247|Homo sapiens serine esterase protein. 36 0.17
M84526-1|AAA35527.1| 228|Homo sapiens adipsin/complement factor... 34 0.52
CR536575-1|CAG38812.1| 228|Homo sapiens DF protein. 34 0.52
BC057807-1|AAH57807.1| 253|Homo sapiens complement factor D (ad... 34 0.52
BC051001-1|AAH51001.1| 243|Homo sapiens CFD protein protein. 34 0.52
BC040146-1|AAH40146.1| 230|Homo sapiens CFD protein protein. 34 0.52
BC034529-1|AAH34529.1| 235|Homo sapiens CFD protein protein. 34 0.52
AJ313463-1|CAC48304.1| 253|Homo sapiens adipsin/complement fact... 34 0.52
BC106047-1|AAI06048.1| 247|Homo sapiens FLJ36070 protein protein. 31 6.4
BC105058-1|AAI05059.1| 312|Homo sapiens likely ortholog of MEF2... 31 6.4
BC105056-1|AAI05057.1| 312|Homo sapiens likely ortholog of MEF2... 31 6.4
BC103975-1|AAI03976.1| 247|Homo sapiens chymase 1, mast cell pr... 31 6.4
AK131427-1|BAD18574.1| 415|Homo sapiens protein ( Homo sapiens ... 31 6.4
AK093389-1|BAC04152.1| 312|Homo sapiens protein ( Homo sapiens ... 31 6.4
>M28879-1|AAA75490.1| 247|Homo sapiens protein ( Human granzyme B
(CTLA-1) gene, complete cds. ).
Length = 247
Score = 38.3 bits (85), Expect = 0.032
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIA-LRVKKIEKFPTYDGGEIHKDVALIYTEKY 617
+LT+A C +I+ V L N K ++ + VK+ P Y+ D+ L+ E+
Sbjct: 59 VLTAAHCWGSSIN-VTLGAHNIKEQEPTQQFIPVKRAIPHPAYNPKNFSNDIMLLQLERK 117
Query: 616 --NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDV 464
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 118 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL 177
Query: 463 GDYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 178 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 222
>J03189-1|AAA36603.1| 247|Homo sapiens protein ( Human proteolytic
serine esterase-like protein (SECT) gene, complete cds.
).
Length = 247
Score = 38.3 bits (85), Expect = 0.032
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIA-LRVKKIEKFPTYDGGEIHKDVALIYTEKY 617
+LT+A C +I+ V L N K ++ + VK+ P Y+ D+ L+ E+
Sbjct: 59 VLTAAHCWGSSIN-VTLGAHNIKEQEPTQQFIPVKRAIPHPAYNPKNFSNDIMLLQLERK 117
Query: 616 --NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDV 464
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 118 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL 177
Query: 463 GDYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 178 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 222
>M38193-1|AAA67124.1| 247|Homo sapiens cytotoxic
T-lymphocyte-associated serine esterase 1 protein.
Length = 247
Score = 37.5 bits (83), Expect = 0.056
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIA-LRVKKIEKFPTYDGGEIHKDVALIYTEKY 617
+LT+A C +I+ V L N K ++ + VK+ P Y+ D+ L+ E+
Sbjct: 59 VLTAAHCWGSSIN-VTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK 117
Query: 616 --NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDV 464
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 118 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL 177
Query: 463 GDYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 178 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 222
>M17016-1|AAA36627.1| 247|Homo sapiens protein ( Human serine
protease-like protein mRNA, complete cds. ).
Length = 247
Score = 37.5 bits (83), Expect = 0.056
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIA-LRVKKIEKFPTYDGGEIHKDVALIYTEKY 617
+LT+A C +I+ V L N K ++ + VK+ P Y+ D+ L+ E+
Sbjct: 59 VLTAAHCWGSSIN-VTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK 117
Query: 616 --NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDV 464
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 118 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL 177
Query: 463 GDYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 178 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 222
>BC030195-1|AAH30195.1| 247|Homo sapiens granzyme B (granzyme 2,
cytotoxic T-lymphocyte-associated serine esterase 1)
protein.
Length = 247
Score = 37.5 bits (83), Expect = 0.056
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIA-LRVKKIEKFPTYDGGEIHKDVALIYTEKY 617
+LT+A C +I+ V L N K ++ + VK+ P Y+ D+ L+ E+
Sbjct: 59 VLTAAHCWGSSIN-VTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK 117
Query: 616 --NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDV 464
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 118 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL 177
Query: 463 GDYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 178 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 222
>AY372494-1|AAR23323.1| 281|Homo sapiens endogenous granzyme B
precursor protein.
Length = 281
Score = 37.5 bits (83), Expect = 0.056
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIA-LRVKKIEKFPTYDGGEIHKDVALIYTEKY 617
+LT+A C +I+ V L N K ++ + VK+ P Y+ D+ L+ E+
Sbjct: 93 VLTAAHCWGSSIN-VTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK 151
Query: 616 --NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDV 464
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 152 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL 211
Query: 463 GDYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 212 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 256
>AY232654-1|AAP70244.1| 235|Homo sapiens granzyme B variant
protein.
Length = 235
Score = 37.5 bits (83), Expect = 0.056
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIA-LRVKKIEKFPTYDGGEIHKDVALIYTEKY 617
+LT+A C +I+ V L N K ++ + VK+ P Y+ D+ L+ E+
Sbjct: 47 VLTAAHCWGSSIN-VTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK 105
Query: 616 --NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDV 464
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 106 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL 165
Query: 463 GDYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 166 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 210
>J04071-1|AAA52118.1| 247|Homo sapiens serine esterase protein.
Length = 247
Score = 35.9 bits (79), Expect = 0.17
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIALRVKKIEKFPTYDGGEIHKDVALIYTEKY- 617
+LT+A C +I+ L + + + + VK+ P Y+ D+ L+ E+
Sbjct: 59 VLTAAHCWGSSINGTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKA 118
Query: 616 -NNTVVSKIKL-GNYTDKKSITDFEAFGYGLNVEVGE----IKELQYVGLENR--ESDVG 461
V ++L N K G+G +G+ ++E++ E+R ESD+
Sbjct: 119 KRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLR 178
Query: 460 DYITGYLD-CI-DTKVP-TCFK-DIGGPAVFGNELIGIVVNGQN 341
Y ++ C+ D ++ T FK D GGP V GIV G+N
Sbjct: 179 HYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRN 222
>M84526-1|AAA35527.1| 228|Homo sapiens adipsin/complement factor D
protein.
Length = 228
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 481 NRESDVGDYITGYLDCIDT-KVPTCFKDIGGPAVFGNELIGIVVNGQNVC 335
NR + IT L C ++ + +C D GGP V G L G+V +G VC
Sbjct: 155 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC 204
>CR536575-1|CAG38812.1| 228|Homo sapiens DF protein.
Length = 228
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 481 NRESDVGDYITGYLDCIDT-KVPTCFKDIGGPAVFGNELIGIVVNGQNVC 335
NR + IT L C ++ + +C D GGP V G L G+V +G VC
Sbjct: 155 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC 204
>BC057807-1|AAH57807.1| 253|Homo sapiens complement factor D
(adipsin) protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 481 NRESDVGDYITGYLDCIDT-KVPTCFKDIGGPAVFGNELIGIVVNGQNVC 335
NR + IT L C ++ + +C D GGP V G L G+V +G VC
Sbjct: 180 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC 229
>BC051001-1|AAH51001.1| 243|Homo sapiens CFD protein protein.
Length = 243
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 481 NRESDVGDYITGYLDCIDT-KVPTCFKDIGGPAVFGNELIGIVVNGQNVC 335
NR + IT L C ++ + +C D GGP V G L G+V +G VC
Sbjct: 170 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC 219
>BC040146-1|AAH40146.1| 230|Homo sapiens CFD protein protein.
Length = 230
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 481 NRESDVGDYITGYLDCIDT-KVPTCFKDIGGPAVFGNELIGIVVNGQNVC 335
NR + IT L C ++ + +C D GGP V G L G+V +G VC
Sbjct: 157 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC 206
>BC034529-1|AAH34529.1| 235|Homo sapiens CFD protein protein.
Length = 235
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 481 NRESDVGDYITGYLDCIDT-KVPTCFKDIGGPAVFGNELIGIVVNGQNVC 335
NR + IT L C ++ + +C D GGP V G L G+V +G VC
Sbjct: 162 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC 211
>AJ313463-1|CAC48304.1| 253|Homo sapiens adipsin/complement factor
D precursor protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.52
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 481 NRESDVGDYITGYLDCIDT-KVPTCFKDIGGPAVFGNELIGIVVNGQNVC 335
NR + IT L C ++ + +C D GGP V G L G+V +G VC
Sbjct: 180 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVC 229
>BC106047-1|AAI06048.1| 247|Homo sapiens FLJ36070 protein protein.
Length = 247
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 459 SPTSDSLFSSPTYCSSLISPTSTFSP*PKASKSVIDFL 572
SP+ DS S + SSL SPT++ SP P+ +D+L
Sbjct: 171 SPSPDSEGLSSVFSSSLPSPTNSSSPSPRDPTDSLDWL 208
>BC105058-1|AAI05059.1| 312|Homo sapiens likely ortholog of
MEF2-activating SAP transcriptional regulator protein.
Length = 312
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 459 SPTSDSLFSSPTYCSSLISPTSTFSP*PKASKSVIDFL 572
SP+ DS S + SSL SPT++ SP P+ +D+L
Sbjct: 236 SPSPDSEGLSSVFSSSLPSPTNSSSPSPRDPTDSLDWL 273
>BC105056-1|AAI05057.1| 312|Homo sapiens likely ortholog of
MEF2-activating SAP transcriptional regulator protein.
Length = 312
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 459 SPTSDSLFSSPTYCSSLISPTSTFSP*PKASKSVIDFL 572
SP+ DS S + SSL SPT++ SP P+ +D+L
Sbjct: 236 SPSPDSEGLSSVFSSSLPSPTNSSSPSPRDPTDSLDWL 273
>BC103975-1|AAI03976.1| 247|Homo sapiens chymase 1, mast cell
protein.
Length = 247
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -2
Query: 793 ILTSARCSQQAIDHVLLNTTNDKNKDSCIALRVKKIEKFPTYDGGEIHKDVALI 632
+LT+ARC+ ++I L + +D+ L V K + P Y+ +H D+ L+
Sbjct: 61 VLTAARCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLL 114
>AK131427-1|BAD18574.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ16552 fis, clone SKMUS2003194. ).
Length = 415
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 459 SPTSDSLFSSPTYCSSLISPTSTFSP*PKASKSVIDFL 572
SP+ DS S + SSL SPT++ SP P+ +D+L
Sbjct: 339 SPSPDSEGLSSVFSSSLPSPTNSSSPSPRDPTDSLDWL 376
>AK093389-1|BAC04152.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ36070 fis, clone TESTI2019488, weakly similar to
PERIOD CIRCADIAN PROTEIN 1. ).
Length = 312
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 459 SPTSDSLFSSPTYCSSLISPTSTFSP*PKASKSVIDFL 572
SP+ DS S + SSL SPT++ SP P+ +D+L
Sbjct: 236 SPSPDSEGLSSVFSSSLPSPTNSSSPSPRDPTDSLDWL 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,836,081
Number of Sequences: 237096
Number of extensions: 2186882
Number of successful extensions: 4185
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4183
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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