Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10f02
         (182 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   1.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   1.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   1.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   1.5  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    20   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    19   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   4.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    19   4.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    18   8.1  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    18   8.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    18   8.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    18   8.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    18   8.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    18   8.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    18   8.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    18   8.1  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 29  VSN*MLC*PPLSYRGYREEVH 91
           ++N  L  PP     YR+EVH
Sbjct: 75  LANGNLVFPPFRAEDYRQEVH 95


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +2

Query: 53  PPLSYRGYREEVHNANFFFT*CIKDTLN---Q*RKHYTHYHVFDTH 181
           P   YRG   +  + NF     IK TL+     + +  H+H+ D+H
Sbjct: 206 PAYQYRGIALDT-SRNFVTVDVIKRTLDGMAASKLNSFHWHITDSH 250


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/27 (22%), Positives = 18/27 (66%)
 Frame = +1

Query: 79  RRSAQC*FFFYIMHKRYIKSIKKTLHT 159
           +R +QC + ++++  RY+ + + + H+
Sbjct: 121 KRWSQCMYMYFLLGFRYLVNDELSAHS 147


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 6/27 (22%), Positives = 18/27 (66%)
 Frame = +1

Query: 79  RRSAQC*FFFYIMHKRYIKSIKKTLHT 159
           +R +QC + ++++  RY+ + + + H+
Sbjct: 435 KRWSQCMYMYFLLGFRYLVNDELSAHS 461


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 155 THYHVFDTH 181
           TH H++D H
Sbjct: 104 THLHIYDLH 112


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 89  ALLLYILYSLAVVSTTFNCSRN*TLIFC 6
           +LL  IL+ +A   + F+C  N    FC
Sbjct: 359 SLLNDILFPVAGFISDFDCDINSIQYFC 386


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +1

Query: 94  C*FFFYIMHKRYIKS-IKKTLHTL 162
           C ++FY MH  +  + I  T+H L
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLL 280


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 158 HYHVFDTH 181
           H H+FD H
Sbjct: 87  HIHIFDLH 94


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 149 HYTHYHVFDTH 181
           HY++YH  D +
Sbjct: 38  HYSNYHYEDPY 48


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 135 INKENITHTTMYLTRI 182
           I +EN  + T+Y T +
Sbjct: 93  IGQENCLYLTIYTTHV 108


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 135 INKENITHTTMYLTRI 182
           I +EN  + T+Y T +
Sbjct: 93  IGQENCLYLTIYTTHV 108


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 135 INKENITHTTMYLTRI 182
           I +EN  + T+Y T +
Sbjct: 93  IGQENCLYLTIYTTHV 108


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 135 INKENITHTTMYLTRI 182
           I +EN  + T+Y T +
Sbjct: 93  IGQENCLYLTIYTTHV 108


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 135 INKENITHTTMYLTRI 182
           I +EN  + T+Y T +
Sbjct: 93  IGQENCLYLTIYTTHV 108


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 149 HYTHYHVFDTH 181
           HY++YH  D +
Sbjct: 38  HYSNYHYEDPY 48


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 149 HYTHYHVFDTH 181
           HY++YH  D +
Sbjct: 38  HYSNYHYEDPY 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,893
Number of Sequences: 336
Number of extensions: 649
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 40
effective length of database: 109,145
effective search space used:  2182900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)