Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e24
         (843 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   5.0  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    24   5.0  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.0  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   6.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   6.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.8  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -3

Query: 496 IRAVNEENLNKRISSRVLDEMERLKRLILVGKTPLKECPPELF 368
           ++  + + L + I SR   + + L  + +V    L +CPPE+F
Sbjct: 356 LKIASSKVLQRLIKSRGKAQAKNLS-VQMVAAEKLSQCPPEMF 397


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 329 PVNHSPEHKYWVV 367
           P +H+PE  +WVV
Sbjct: 38  PADHNPERPFWVV 50


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 579 SVRGWRSTWDQTWCGSRTRTT 517
           S+R W+S WD   C ++ RTT
Sbjct: 844 SMRKWQSEWD---CSTKGRTT 861


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 190  QLLAKCREEIEEQKQLDIEKGVRFTDEQ 107
            Q  A  REE E Q+QL  E+  R T+E+
Sbjct: 1084 QRAASNREEAEIQQQLQREEDERRTEER 1111


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 640 PNLPRWWQAKVIQYAFAHPH 581
           PN P WWQ++ +     +P+
Sbjct: 108 PNNPTWWQSETMFEGVQYPN 127


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -3

Query: 169 EEIEEQKQLDIEKGVRFTDEQFALMKYETNDVKTLKNLTTVDE 41
           E+++  KQL I   +R T+ +  L ++  N+   L+ LTT+DE
Sbjct: 181 EQLDSNKQLAI--ALR-TESKLMLFRF--NNQYNLEKLTTIDE 218


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 391 KECPPELFHHPVFVFW 344
           +ECPP   ++P   FW
Sbjct: 232 QECPPMQIYNPTNYFW 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,265
Number of Sequences: 2352
Number of extensions: 13043
Number of successful extensions: 77
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)