Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e23
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.76 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 626 FYFVLFFLISICMYFLSFTF 567
           +YF   F+I +C+Y+  + F
Sbjct: 101 YYFYYAFIILLCVYYFYYAF 120



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 629 YFYFVLFFLISICMYFLSFTFF 564
           YF   LFFL+ I  ++ +F  F
Sbjct: 135 YFVVPLFFLLCIYYFYCAFIIF 156


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +1

Query: 196 HCLHDT--EDLFASYESYLGNSM*IPQHYTN 282
           H  H T   D + +Y S + N+  +P HY+N
Sbjct: 11  HSQHGTYPSDNYYNYTSDIPNAQQMPPHYSN 41


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +1

Query: 196 HCLHDT--EDLFASYESYLGNSM*IPQHYTN 282
           H  H T   D + +Y S + N+  +P HY+N
Sbjct: 11  HSQHGTYPSDNYYNYTSDIPNAQQMPPHYSN 41


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +1

Query: 196 HCLHDT--EDLFASYESYLGNSM*IPQHYTN 282
           H  H T   D + +Y S + N+  +P HY+N
Sbjct: 11  HSQHGTYPSDNYYNYTSDIPNAQQMPPHYSN 41


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 466 RCQIGDLVKSRKHGSYARSW*GYLPVGAALPPQCP 362
           RC  G+ + S +  +  R      PVG ALPP  P
Sbjct: 97  RCPSGESMLSER-AALLRGVPTLSPVGVALPPTLP 130


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 635 NEYFYFVLFFLISICMYFLSFTFFNGWPFPVS 540
           N+Y  F++ F +S+ +  + +   +  P PV+
Sbjct: 319 NKYCNFIILFYLSVFVILVYYASLDETPNPVT 350


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 535 VNDTGNGQPLKKVKLRKYIQI 597
           +++T N +PLK VK+R  + +
Sbjct: 106 IDETLNSKPLKPVKIRTKVYL 126



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 635 NEYFYFVLFFLISICMYFLSFTFF 564
           N YF   +  +  +  YF   TFF
Sbjct: 224 NRYFEVQVLTIFGVSFYFFISTFF 247


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 535 VNDTGNGQPLKKVKLRKYIQI 597
           +++T N +PLK VK+R  + +
Sbjct: 102 IDETLNSKPLKPVKIRTKVYL 122



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 635 NEYFYFVLFFLISICMYFLSFTFF 564
           N YF   +  +  +  YF   TFF
Sbjct: 220 NRYFEVQVLTIFGVSFYFFISTFF 243


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 60  RLARYYKTKSVLPPNWK 10
           RL  Y  T+SVL  +WK
Sbjct: 159 RLRMYINTESVLDGDWK 175


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 130 LSHCNSFLD 156
           LSHCNS++D
Sbjct: 246 LSHCNSYVD 254


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 396 RYPYQERAYDPCLRLFTKSPI*QRQQENPKRWLPE-DKLVT 515
           RY Y E+     L  FTKS I +RQ+   +  +PE D++ T
Sbjct: 237 RY-YLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEVYT 276


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 396 RYPYQERAYDPCLRLFTKSPI*QRQQENPKRWLPE-DKLVT 515
           RY Y E+     L  FTKS I +RQ+   +  +PE D++ T
Sbjct: 237 RY-YLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEVYT 276


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 615 YKIKVFIMYK*LIIITYFSTC 677
           Y I VF++   ++I TY S C
Sbjct: 207 YSISVFMVPLVVLIFTYTSIC 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,244
Number of Sequences: 336
Number of extensions: 3716
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)