Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10e23
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 281 2e-75
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 281 2e-75
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 281 2e-75
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 281 2e-75
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 281 2e-75
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 281 2e-75
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 281 2e-75
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 281 2e-75
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 218 1e-56
BC014608-1|AAH14608.1| 361|Homo sapiens spermatogenesis associa... 30 6.7
AY963797-1|AAY33662.1| 361|Homo sapiens spermatogenesis-related... 30 6.7
AL445428-2|CAH70554.1| 361|Homo sapiens novel protein (FLJ25725... 30 6.7
AL354659-3|CAH70665.1| 361|Homo sapiens novel protein (FLJ25725... 30 6.7
AK098591-1|BAC05343.1| 361|Homo sapiens protein ( Homo sapiens ... 30 6.7
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 281 bits (688), Expect = 2e-75
Identities = 130/143 (90%), Positives = 139/143 (97%)
Frame = -3
Query: 429 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 250
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 249 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 70
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 69 RIHRLARYYKTKSVLPPNWKYES 1
RIHRLARYYKTK VLPPNWKYES
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYES 143
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 218 bits (533), Expect = 1e-56
Identities = 104/116 (89%), Positives = 112/116 (96%)
Frame = -3
Query: 396 SQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 217
SQSALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 216 LRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 49
LRI+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 61 LRILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
>BC014608-1|AAH14608.1| 361|Homo sapiens spermatogenesis associated
17 protein.
Length = 361
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 387 PTGRYPYQERAYDPCLRLFTK-SPI*QRQQ---ENPKRWLPEDKLVTVLP 524
P Y E+ Y P + L +K PI ++Q ENPK+W+ + TVLP
Sbjct: 294 PFSSYHKNEK-YIPSMHLSSKYGPISYKEQFRSENPKKWICDKDFQTVLP 342
>AY963797-1|AAY33662.1| 361|Homo sapiens spermatogenesis-related
protein 11 protein.
Length = 361
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 387 PTGRYPYQERAYDPCLRLFTK-SPI*QRQQ---ENPKRWLPEDKLVTVLP 524
P Y E+ Y P + L +K PI ++Q ENPK+W+ + TVLP
Sbjct: 294 PFSSYHKNEK-YIPSMHLSSKYGPISYKEQFRSENPKKWICDKDFQTVLP 342
>AL445428-2|CAH70554.1| 361|Homo sapiens novel protein (FLJ25725)
protein.
Length = 361
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 387 PTGRYPYQERAYDPCLRLFTK-SPI*QRQQ---ENPKRWLPEDKLVTVLP 524
P Y E+ Y P + L +K PI ++Q ENPK+W+ + TVLP
Sbjct: 294 PFSSYHKNEK-YIPSMHLSSKYGPISYKEQFRSENPKKWICDKDFQTVLP 342
>AL354659-3|CAH70665.1| 361|Homo sapiens novel protein (FLJ25725)
protein.
Length = 361
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 387 PTGRYPYQERAYDPCLRLFTK-SPI*QRQQ---ENPKRWLPEDKLVTVLP 524
P Y E+ Y P + L +K PI ++Q ENPK+W+ + TVLP
Sbjct: 294 PFSSYHKNEK-YIPSMHLSSKYGPISYKEQFRSENPKKWICDKDFQTVLP 342
>AK098591-1|BAC05343.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ25725 fis, clone TST05462. ).
Length = 361
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +3
Query: 387 PTGRYPYQERAYDPCLRLFTK-SPI*QRQQ---ENPKRWLPEDKLVTVLP 524
P Y E+ Y P + L +K PI ++Q ENPK+W+ + TVLP
Sbjct: 294 PFSSYHKNEK-YIPSMHLSSKYGPISYKEQFRSENPKKWICDKDFQTVLP 342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,816,109
Number of Sequences: 237096
Number of extensions: 2129327
Number of successful extensions: 4401
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4401
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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