Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e14
         (344 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6PFI5 Cluster: Zgc:66474; n=3; Danio rerio|Rep: Zgc:66...    31   5.3  
UniRef50_A6LHQ8 Cluster: Putative uncharacterized protein; n=1; ...    31   5.3  
UniRef50_A7PZJ3 Cluster: Chromosome chr15 scaffold_40, whole gen...    31   6.9  
UniRef50_Q5K9R4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.9  
UniRef50_A2FGB0 Cluster: Putative uncharacterized protein; n=1; ...    30   9.2  

>UniRef50_Q6PFI5 Cluster: Zgc:66474; n=3; Danio rerio|Rep: Zgc:66474
           - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 1026

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 146 EERCLRLKNRHSFSFLNVKRRFLNCSKTADVNGLRDIYFTSITLLSAPTMSDDGVNNCGF 325
           EE  +R++  +    L  + R+L  + +AD  G  +   TSI   S P+  D+   NCGF
Sbjct: 34  EEETIRVRKENEV--LRRRLRWLEGATSADWPGPSEPVMTSIPEDSNPSQQDENTVNCGF 91


>UniRef50_A6LHQ8 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 367

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +3

Query: 33  GPFGTE*TSLXISFDLGLLVNISNVTSTDS 122
           GP G + T L  S DL LLV  SNVT+  S
Sbjct: 33  GPAGIDATELYASLDLSLLVGNSNVTTKSS 62


>UniRef50_A7PZJ3 Cluster: Chromosome chr15 scaffold_40, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr15 scaffold_40, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 597

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 218 CSKTADVNGLRDIYFTSITLLSAPTMSDDGVN 313
           C +T  +NG+  +YF SI   S PT+S   +N
Sbjct: 59  CKQTCSLNGVNRLYFQSIGDASDPTLSQKPLN 90


>UniRef50_Q5K9R4 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 1129

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 113 YRQLWXPTSLLEERCLRLKNRHSFSFLNVKRRFLNCSKTAD 235
           YR L    SL EER  RL++ + F    + R+ LN  K  D
Sbjct: 401 YRNLDDKASLDEEREKRLRSEYEFRISGLDRKLLNAEKERD 441


>UniRef50_A2FGB0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 601

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +2

Query: 179 SFSFLNV-KRRFLNCSKTADVNGLRDIYFTSITLLSAPTMSDDGVNNCGFYN 331
           SFS L+  K+R     K  +V+ +  I +TS+ +++   +S + +  CG++N
Sbjct: 224 SFSILDSSKKRTFPIEKVPNVD-MEQIMYTSLNIINMDRLSKNNLPTCGYFN 274


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,599,110
Number of Sequences: 1657284
Number of extensions: 4488501
Number of successful extensions: 8615
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8615
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)