Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e14
         (344 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001693-1|AAN71448.1|  677|Drosophila melanogaster RE59077p pro...    27   6.5  
AY058270-1|AAL13499.1|  522|Drosophila melanogaster GH02310p pro...    27   6.5  
AF395331-1|AAK77868.1|  677|Drosophila melanogaster transmembran...    27   6.5  
AE013599-3375|AAF46830.1|  677|Drosophila melanogaster CG3413-PD...    27   6.5  
AE013599-3374|AAM68220.1|  677|Drosophila melanogaster CG3413-PC...    27   6.5  
AE013599-3373|AAF46829.1|  677|Drosophila melanogaster CG3413-PB...    27   6.5  
AE013599-3372|AAM68219.1|  677|Drosophila melanogaster CG3413-PA...    27   6.5  

>BT001693-1|AAN71448.1|  677|Drosophila melanogaster RE59077p
           protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 241 WFTRYLFYLDHPIICPY 291
           W    + Y++HP++C Y
Sbjct: 181 WLVERIVYMEHPVVCSY 197


>AY058270-1|AAL13499.1|  522|Drosophila melanogaster GH02310p
           protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 241 WFTRYLFYLDHPIICPY 291
           W    + Y++HP++C Y
Sbjct: 26  WLVERIVYMEHPVVCSY 42


>AF395331-1|AAK77868.1|  677|Drosophila melanogaster transmembrane
           protein windpipe protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 241 WFTRYLFYLDHPIICPY 291
           W    + Y++HP++C Y
Sbjct: 181 WLVERIVYMEHPVVCSY 197


>AE013599-3375|AAF46830.1|  677|Drosophila melanogaster CG3413-PD,
           isoform D protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 241 WFTRYLFYLDHPIICPY 291
           W    + Y++HP++C Y
Sbjct: 181 WLVERIVYMEHPVVCSY 197


>AE013599-3374|AAM68220.1|  677|Drosophila melanogaster CG3413-PC,
           isoform C protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 241 WFTRYLFYLDHPIICPY 291
           W    + Y++HP++C Y
Sbjct: 181 WLVERIVYMEHPVVCSY 197


>AE013599-3373|AAF46829.1|  677|Drosophila melanogaster CG3413-PB,
           isoform B protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 241 WFTRYLFYLDHPIICPY 291
           W    + Y++HP++C Y
Sbjct: 181 WLVERIVYMEHPVVCSY 197


>AE013599-3372|AAM68219.1|  677|Drosophila melanogaster CG3413-PA,
           isoform A protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 241 WFTRYLFYLDHPIICPY 291
           W    + Y++HP++C Y
Sbjct: 181 WLVERIVYMEHPVVCSY 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,042,359
Number of Sequences: 53049
Number of extensions: 207156
Number of successful extensions: 420
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)