Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e11
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   3.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   3.7  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         24   4.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.5  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   8.5  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 430 PFRCGSHSGRIRRCCWCPE 486
           P   GS SGR R   W PE
Sbjct: 232 PTEVGSSSGRFRPILWTPE 250


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 430 PFRCGSHSGRIRRCCWCPE 486
           P   GS SGR R   W PE
Sbjct: 232 PTEVGSSSGRFRPILWTPE 250


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 310 GPYPPNDLPGTLSPD 354
           GPYPP+ +PG +  D
Sbjct: 12  GPYPPHMVPGGVDSD 26


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 247 PTHPLGADTSYEVWHPVRKVEFILDS*AIYHKVGSELVQP 128
           P HPL         HP+  ++  L    + H + SEL+QP
Sbjct: 405 PVHPLAG-------HPLSGIKQELPELPVRHSLSSELMQP 437


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 247 PTHPLGADTSYEVWHPVRKVEFILDS*AIYHKVGSELVQP 128
           P HPL         HP+  ++  L    + H + SEL+QP
Sbjct: 405 PVHPLAG-------HPLSGIKQELPELPVRHSLSSELMQP 437


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 247 PTHPLGADTSYEVWHPVRKVEFILDS*AIYHKVGSELVQP 128
           P HPL         HP+  ++  L    + H + SEL+QP
Sbjct: 357 PVHPLAG-------HPLSGIKQELPELPVRHSLSSELMQP 389


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 247 PTHPLGADTSYEVWHPVRKVEFILDS*AIYHKVGSELVQP 128
           P HPL         HP+  ++  L    + H + SEL+QP
Sbjct: 365 PVHPLAG-------HPLSGIKQELPELPVRHSLSSELMQP 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,630
Number of Sequences: 2352
Number of extensions: 14719
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)