Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e09
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.3  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   5.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 16/75 (21%), Positives = 31/75 (41%)
 Frame = -2

Query: 536 HLHFCRYTMFS*IFVVRILVKASRLNFLVXXXXXXXXTKCLEFYFLPLS*NFPFYA*CCA 357
           H   C Y  +   F++ + V      F++          C+ ++ +PL      Y   CA
Sbjct: 95  HFLLCTYYFYY-AFIILLCVYYFYYAFIIFTVHLLFLL-CIYYFVVPLFFLLCIYYFYCA 152

Query: 356 YLIHLINSKFINQIY 312
           ++I  ++  F+  IY
Sbjct: 153 FIIFTVHLLFLLCIY 167


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 153 NGECRIPNVCAGAQGKVTQTKE 218
           +G+C  P++C G  G +  T E
Sbjct: 53  SGQCFGPSICCGPFGCLVGTPE 74


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 462 KFPSNILLYILLNEMFGILFSTAVMKLSILRVMLCLFN 349
           KF +++ +Y+  N++FG +  T          +L L+N
Sbjct: 9   KFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYN 46


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 467 DWP*LKFLRQKFMKTLCTYRNVNA 538
           +W   K L++KF  T+CT  +  A
Sbjct: 301 NWKNDKSLKRKFYLTICTIMSAAA 324


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 462 KFPSNILLYILLNEMFGILFSTAVMKLSILRVMLCLFN 349
           KF +++ +Y+  N++FG +  T          +L L+N
Sbjct: 27  KFLNSLQIYLQHNQIFGFVTFTCTRSNFRSSKLLILYN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,806
Number of Sequences: 336
Number of extensions: 2280
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)