Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e08
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol ...    29   2.2  
U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol ...    29   2.2  
U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol ...    29   2.2  
U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol ...    29   2.2  
U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol ...    29   2.2  
Z74027-2|CAA98420.1|  210|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF324058-1|AAK01419.1|  210|Caenorhabditis elegans Ly-6-related ...    29   2.9  
Z81575-7|CAB04638.1|  367|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF068709-6|AAC19249.1|  319|Caenorhabditis elegans Serpentine re...    28   5.0  
U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform e protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 147 CLIQYVYCCVCRK 109
           CLI+  YCCVCRK
Sbjct: 90  CLIKRKYCCVCRK 102


>U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform b protein.
          Length = 952

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 147 CLIQYVYCCVCRK 109
           CLI+  YCCVCRK
Sbjct: 90  CLIKRKYCCVCRK 102


>U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform d protein.
          Length = 796

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 147 CLIQYVYCCVCRK 109
           CLI+  YCCVCRK
Sbjct: 90  CLIKRKYCCVCRK 102


>U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform a protein.
          Length = 950

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 147 CLIQYVYCCVCRK 109
           CLI+  YCCVCRK
Sbjct: 90  CLIKRKYCCVCRK 102


>U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform c protein.
          Length = 794

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 147 CLIQYVYCCVCRK 109
           CLI+  YCCVCRK
Sbjct: 90  CLIKRKYCCVCRK 102


>Z74027-2|CAA98420.1|  210|Caenorhabditis elegans Hypothetical
           protein C13G3.2 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 92  RILLTYFNMISFEYVICICKNVYYN 18
           R L  Y N +S +YV+C C   Y N
Sbjct: 126 RSLPMYSNTVSMDYVVCTCNGDYCN 150


>AF324058-1|AAK01419.1|  210|Caenorhabditis elegans Ly-6-related
           protein HOT-6 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 92  RILLTYFNMISFEYVICICKNVYYN 18
           R L  Y N +S +YV+C C   Y N
Sbjct: 126 RSLPMYSNTVSMDYVVCTCNGDYCN 150


>Z81575-7|CAB04638.1|  367|Caenorhabditis elegans Hypothetical
           protein R08H2.8 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +3

Query: 27  YVFTNADDIFERYHIKVC*QDSCLKKSIFCKHNNIHIVLNSQTRYKIL 170
           Y+F  +DDI + YH+KV   ++  +  +F  H+   + + + TR  +L
Sbjct: 7   YIFLLSDDIQKPYHLKVF--ETSAQPVVFRDHDYQPVQVKADTRVSML 52


>AF068709-6|AAC19249.1|  319|Caenorhabditis elegans Serpentine
           receptor, class t protein27 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 167 YFISSLAV*YNMYIVVFAENRFFQARILLTYFNMISF 57
           Y + +L V Y MY V+F     F ++ L  +FN + F
Sbjct: 153 YGVLTLPVIYGMYFVIFTTPIAFSSKHLTWFFNPLIF 189


>U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical
           protein F02E8.2a protein.
          Length = 445

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 89  ILLTYFNMISFEYVICICKNVYY--NIFPV 6
           I+  YF ++   + +CI  N+ Y  NIFPV
Sbjct: 264 IIYCYFRILGTRHFLCITVNLSYTSNIFPV 293


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,522,511
Number of Sequences: 27780
Number of extensions: 185820
Number of successful extensions: 421
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)