Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e05
         (468 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67703-1|CAA47937.1|   63|Drosophila melanogaster Mst84Da protein.     31   1.0  
AE014297-607|AAF54022.1|   63|Drosophila melanogaster CG17946-PA...    31   1.0  
AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-P...    30   1.4  
AE014297-606|AAF54024.1|   74|Drosophila melanogaster CG17934-PA...    30   1.8  
AF273708-1|AAL35411.1|  118|Drosophila melanogaster PFTAIRE-inte...    29   3.1  
AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA...    29   3.1  
BT003608-1|AAO39611.1|  377|Drosophila melanogaster GH19274p pro...    28   5.5  
BT003318-1|AAO25078.1|  517|Drosophila melanogaster AT26991p pro...    28   5.5  
BT001317-1|AAN71072.1|  517|Drosophila melanogaster AT15066p pro...    28   5.5  
AE014296-204|AAN11465.1|  517|Drosophila melanogaster CG9130-PB,...    28   5.5  
AE014296-203|AAN11464.1|  517|Drosophila melanogaster CG9130-PA,...    28   5.5  
BT029620-1|ABL75679.1|  127|Drosophila melanogaster IP17106p pro...    28   7.2  
BT029556-1|ABL75616.1|  127|Drosophila melanogaster IP16806p pro...    28   7.2  
U00683-1|AAC46468.1| 1354|Drosophila melanogaster formylglycinea...    27   9.6  
BT011143-1|AAR82811.1| 1373|Drosophila melanogaster GM01721p pro...    27   9.6  
AE014134-1030|AAN10574.1| 1354|Drosophila melanogaster CG9127-PC...    27   9.6  
AE014134-1029|AAN10573.1| 1354|Drosophila melanogaster CG9127-PB...    27   9.6  
AE014134-1028|AAF52329.1| 1354|Drosophila melanogaster CG9127-PA...    27   9.6  

>X67703-1|CAA47937.1|   63|Drosophila melanogaster Mst84Da protein.
          Length = 63

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -1

Query: 396 GGCSGCPSPCNSTRNCTPCCSGGS 325
           GGC  C  PC     C PCC G S
Sbjct: 34  GGCGPCCGPCGG---CGPCCGGTS 54


>AE014297-607|AAF54022.1|   63|Drosophila melanogaster CG17946-PA
           protein.
          Length = 63

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -1

Query: 396 GGCSGCPSPCNSTRNCTPCCSGGS 325
           GGC  C  PC     C PCC G S
Sbjct: 34  GGCGPCCGPCGG---CGPCCGGTS 54


>AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-PC,
           isoform C protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
 Frame = -1

Query: 465 NKSKMCDRMDAINKLQTVMSAIRGGCSGC-PSPCNSTRNC----TPCCSGGSL 322
           NK   C    A N        + GGC GC P  CN +  C     PCC   SL
Sbjct: 76  NKRMRCAATGAPNGGAGCGGRVAGGCCGCGPCCCNVSPCCGPHSPPCCGSHSL 128


>AE014297-606|AAF54024.1|   74|Drosophila melanogaster CG17934-PA
           protein.
          Length = 74

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 390 CSGCPSPCNSTRNCTPCCSG 331
           C  C +PC     C PCC G
Sbjct: 35  CGSCCAPCGPCGPCGPCCGG 54


>AF273708-1|AAL35411.1|  118|Drosophila melanogaster
           PFTAIRE-interacting factor 2 protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 390 CSGCPSPCNSTRNCTPCCS 334
           C+ C +PC  T  CTPCCS
Sbjct: 81  CTPCCTPC-CTPCCTPCCS 98


>AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA
           protein.
          Length = 118

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 390 CSGCPSPCNSTRNCTPCCS 334
           C+ C +PC  T  CTPCCS
Sbjct: 81  CTPCCTPC-CTPCCTPCCS 98


>BT003608-1|AAO39611.1|  377|Drosophila melanogaster GH19274p
           protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
 Frame = -1

Query: 381 CP---SPCNSTRNCTPCCSGGS 325
           CP    PC+    C+PCC GG+
Sbjct: 132 CPPPCDPCDPCDPCSPCCGGGT 153


>BT003318-1|AAO25078.1|  517|Drosophila melanogaster AT26991p
           protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
 Frame = -1

Query: 381 CP---SPCNSTRNCTPCCSGGS 325
           CP    PC+    C+PCC GG+
Sbjct: 272 CPPPCDPCDPCDPCSPCCGGGT 293


>BT001317-1|AAN71072.1|  517|Drosophila melanogaster AT15066p
           protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
 Frame = -1

Query: 381 CP---SPCNSTRNCTPCCSGGS 325
           CP    PC+    C+PCC GG+
Sbjct: 272 CPPPCDPCDPCDPCSPCCGGGT 293


>AE014296-204|AAN11465.1|  517|Drosophila melanogaster CG9130-PB,
           isoform B protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
 Frame = -1

Query: 381 CP---SPCNSTRNCTPCCSGGS 325
           CP    PC+    C+PCC GG+
Sbjct: 272 CPPPCDPCDPCDPCSPCCGGGT 293


>AE014296-203|AAN11464.1|  517|Drosophila melanogaster CG9130-PA,
           isoform A protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
 Frame = -1

Query: 381 CP---SPCNSTRNCTPCCSGGS 325
           CP    PC+    C+PCC GG+
Sbjct: 272 CPPPCDPCDPCDPCSPCCGGGT 293


>BT029620-1|ABL75679.1|  127|Drosophila melanogaster IP17106p
           protein.
          Length = 127

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -1

Query: 396 GGC-SGCPSPCNSTRNCTPCCSGGS 325
           G C SGC  PC     C  CC GGS
Sbjct: 13  GSCGSGC-KPCGGGGCCGSCCVGGS 36


>BT029556-1|ABL75616.1|  127|Drosophila melanogaster IP16806p
           protein.
          Length = 127

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -1

Query: 396 GGC-SGCPSPCNSTRNCTPCCSGGS 325
           G C SGC  PC     C  CC GGS
Sbjct: 13  GSCGSGC-KPCGGGGCCGSCCVGGS 36


>U00683-1|AAC46468.1| 1354|Drosophila melanogaster
           formylglycineamide ribotide amidotransferaseprotein.
          Length = 1354

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 231 IGRGGWPIANTASY--GVWKIIGY 296
           +GRGG PIA TA Y  G   I GY
Sbjct: 342 VGRGGVPIAGTAGYCVGALHIPGY 365


>BT011143-1|AAR82811.1| 1373|Drosophila melanogaster GM01721p
           protein.
          Length = 1373

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 231 IGRGGWPIANTASY--GVWKIIGY 296
           +GRGG PIA TA Y  G   I GY
Sbjct: 361 VGRGGVPIAGTAGYCVGALHIPGY 384


>AE014134-1030|AAN10574.1| 1354|Drosophila melanogaster CG9127-PC,
           isoform C protein.
          Length = 1354

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 231 IGRGGWPIANTASY--GVWKIIGY 296
           +GRGG PIA TA Y  G   I GY
Sbjct: 342 VGRGGVPIAGTAGYCVGALHIPGY 365


>AE014134-1029|AAN10573.1| 1354|Drosophila melanogaster CG9127-PB,
           isoform B protein.
          Length = 1354

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 231 IGRGGWPIANTASY--GVWKIIGY 296
           +GRGG PIA TA Y  G   I GY
Sbjct: 342 VGRGGVPIAGTAGYCVGALHIPGY 365


>AE014134-1028|AAF52329.1| 1354|Drosophila melanogaster CG9127-PA,
           isoform A protein.
          Length = 1354

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 231 IGRGGWPIANTASY--GVWKIIGY 296
           +GRGG PIA TA Y  G   I GY
Sbjct: 342 VGRGGVPIAGTAGYCVGALHIPGY 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,734,512
Number of Sequences: 53049
Number of extensions: 439938
Number of successful extensions: 1441
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)