Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e02
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   3.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   6.5  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    22   6.5  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    22   6.5  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    22   8.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    22   8.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    22   8.6  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    22   8.6  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 49  WWREI*VQTFRVYHHAE*ESKPSN 120
           W  E  V  F  +HH+  ++KP N
Sbjct: 465 WGHEQGVSLFASHHHSTGDNKPPN 488


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 162  CTTAPMVHTVLEAHSYGRHIDQALTNIVSY 251
            C T  + HTVL  ++Y  + D+  + ++ Y
Sbjct: 952  CYTTVIPHTVLTQYNYTVNTDEKDSFVLGY 981


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 108 QTKQRQSPEPCYNSFACLCTTAPMVHTVLEAHS 206
           +T Q+ S   C NS  C+   A + HT+ +  S
Sbjct: 50  ETNQKSST--CTNSKECIAGIARVYHTIKQLKS 80


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 108 QTKQRQSPEPCYNSFACLCTTAPMVHTVLEAHS 206
           +T Q+ S   C NS  C+   A + HT+ +  S
Sbjct: 50  ETNQKSST--CTNSKECIAGIARVYHTIKQLKS 80


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 136 GSGDWRCLVCFLI 98
           G+ DWR ++C L+
Sbjct: 244 GTPDWRLVLCLLV 256


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 136 GSGDWRCLVCFLI 98
           G+ DWR ++C L+
Sbjct: 244 GTPDWRLVLCLLV 256


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -1

Query: 273 LRVKICLNKRQYSSKPDRCDAHMNEL 196
           +++++  N     S+P +C++ M EL
Sbjct: 460 IKIRLEKNSIDLGSRPLKCESQMREL 485


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -1

Query: 153 QSYYNKVLVIGVAWFAFSFGMM 88
           + Y    +  G+ W  F+FG++
Sbjct: 565 RQYVYPTVAYGIGWCIFAFGLL 586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,988
Number of Sequences: 2352
Number of extensions: 8680
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)