Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10e01
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56982 Cluster: PREDICTED: similar to radial spo... 222 1e-56
UniRef50_UPI0000DB6FFB Cluster: PREDICTED: similar to radial spo... 218 1e-55
UniRef50_Q5TD94 Cluster: Radial spokehead-like protein 3; n=26; ... 196 5e-49
UniRef50_Q5TD95 Cluster: OTTHUMP00000017070; n=3; Eutheria|Rep: ... 112 1e-23
UniRef50_UPI00015B5A88 Cluster: PREDICTED: similar to radial spo... 98 3e-19
UniRef50_Q01656 Cluster: Flagellar radial spoke protein 4; n=1; ... 79 1e-13
UniRef50_Q01657 Cluster: Flagellar radial spoke protein 6; n=1; ... 70 7e-11
UniRef50_UPI0000D9EEE3 Cluster: PREDICTED: similar to radial spo... 70 9e-11
UniRef50_Q9W1D3 Cluster: CG3121-PA; n=2; Sophophora|Rep: CG3121-... 68 4e-10
UniRef50_A0CVW3 Cluster: Chromosome undetermined scaffold_3, who... 64 5e-09
UniRef50_Q4DHQ3 Cluster: Flagellar radial spoke protein-like, pu... 59 2e-07
UniRef50_A0EBU2 Cluster: Chromosome undetermined scaffold_88, wh... 58 2e-07
UniRef50_Q38J87 Cluster: Radial spoke head 1; n=2; Tetrahymena t... 55 3e-06
UniRef50_UPI0001509EA2 Cluster: hypothetical protein TTHERM_0050... 54 5e-06
UniRef50_A4I4B9 Cluster: Flagellar radial spoke protein-like, pu... 53 8e-06
UniRef50_Q4QGB1 Cluster: Flagellar radial spoke protein, putativ... 51 4e-05
UniRef50_A0CN27 Cluster: Chromosome undetermined scaffold_22, wh... 50 8e-05
UniRef50_Q8IIV6 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A2D924 Cluster: RSHL1 protein, putative; n=1; Trichomon... 46 0.001
UniRef50_A5K470 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q7RM02 Cluster: Drosophila melanogaster GH13165p; n=4; ... 44 0.005
UniRef50_Q7R281 Cluster: GLP_422_71304_68782; n=1; Giardia lambl... 42 0.027
UniRef50_A2FYS6 Cluster: Flagellar radial spoke protein, putativ... 42 0.027
UniRef50_Q5TP17 Cluster: ENSANGP00000027464; n=1; Anopheles gamb... 39 0.19
UniRef50_UPI0000383E76 Cluster: COG0513: Superfamily II DNA and ... 37 0.59
UniRef50_Q7QWD8 Cluster: GLP_336_40147_37625; n=1; Giardia lambl... 37 0.59
UniRef50_Q381C2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q6ZFH8 Cluster: Putative uncharacterized protein OJ1506... 33 7.3
>UniRef50_UPI0000D56982 Cluster: PREDICTED: similar to radial
spokehead-like 3; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to radial spokehead-like 3 - Tribolium
castaneum
Length = 579
Score = 222 bits (542), Expect = 1e-56
Identities = 119/259 (45%), Positives = 146/259 (56%), Gaps = 11/259 (4%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXX 699
TP QIRVAR + TG+LD + S+P F G+ERN LRAQ+ARI AGT +SP GFYTF
Sbjct: 291 TPKQIRVARQIYKTFTGDLDQPIVSYPFFPGSERNLLRAQIARISAGTHISPLGFYTFGG 350
Query: 698 XXXXXXXXXXXXXDLN----FNPNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGRTLWWN 531
+ NP Y +KDL D S+ +WVHH HIL QGRT WWN
Sbjct: 351 EGMGEGGEADEEEEEGNKGEIKENPKYDPVPIKDLTDRSMMFWVHHNHHILNQGRTTWWN 410
Query: 530 PN----AGMXXXXXXXXXXXXXXXXXXXXXP---LFTSLSEDSRLEGMTAWSVRSSSSLT 372
PN G+ L T SED L+ + AWSVRSSS +
Sbjct: 411 PNPLPETGLDEELGEEEEEAKPVVMGPEPETGPPLLTPCSEDVTLDAIPAWSVRSSSGVA 470
Query: 371 PERAVAALRSNLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGPAQLPRPQDEYPIGPEV 192
E AVA +RSN WPGA +FAT G+ +Y G GLK PN+ P LP + +YP+GPE+
Sbjct: 471 EEFAVAIVRSNFWPGAYSFATQGKMFHNVYFGSGLKTMVPNFSPMPLPPVEQDYPMGPEI 530
Query: 191 MEMADPTFADEEAYRIAHL 135
ME+ DPT A+EEA+RIAHL
Sbjct: 531 MEIVDPTGAEEEAWRIAHL 549
>UniRef50_UPI0000DB6FFB Cluster: PREDICTED: similar to radial
spokehead-like 3; n=1; Apis mellifera|Rep: PREDICTED:
similar to radial spokehead-like 3 - Apis mellifera
Length = 561
Score = 218 bits (533), Expect = 1e-55
Identities = 114/253 (45%), Positives = 147/253 (58%), Gaps = 5/253 (1%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXX 699
TP QI +AR VR TGNL+ + +FPPF GTE+NYLRAQ+ARI + T VSP GFYTF
Sbjct: 301 TPQQIVIARYIVRYCTGNLETPIHTFPPFPGTEKNYLRAQIARISSTTQVSPIGFYTFGI 360
Query: 698 XXXXXXXXXXXXXD--LNFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGRTLWWNPN 525
L + N Y +KDL+D S++ W HH +ILKQGR WW+P
Sbjct: 361 GDEEEEVLEEMAEGNTLLLSENVNYDPLPIKDLIDPSMSNWCHHMPYILKQGRVEWWSPR 420
Query: 524 AG---MXXXXXXXXXXXXXXXXXXXXXPLFTSLSEDSRLEGMTAWSVRSSSSLTPERAVA 354
+ PL T LSED+ ++ + W SS + P++AVA
Sbjct: 421 KQEEELEEEIGEEEEEEEEKEEKEIGPPLLTPLSEDAIIDSIIPWGTSLSSRVQPDQAVA 480
Query: 353 ALRSNLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGPAQLPRPQDEYPIGPEVMEMADP 174
+RSN+WPGA AFA SG++ +YIGWG K+ NY P +P QD+Y IGPE+ME+ DP
Sbjct: 481 LIRSNIWPGAYAFA-SGRRCANVYIGWGHKYMAYNYSPQSMPPVQDQYKIGPEIMEIQDP 539
Query: 173 TFADEEAYRIAHL 135
TF EEA+RIAHL
Sbjct: 540 TFEQEEAFRIAHL 552
>UniRef50_Q5TD94 Cluster: Radial spokehead-like protein 3; n=26;
Eumetazoa|Rep: Radial spokehead-like protein 3 - Homo
sapiens (Human)
Length = 716
Score = 196 bits (479), Expect = 5e-49
Identities = 107/247 (43%), Positives = 139/247 (56%), Gaps = 2/247 (0%)
Frame = -3
Query: 875 PDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXXX 696
P QI +AR + TG LDA + S+PPF G E NYLRAQ+ARI AGT VSP GFY F
Sbjct: 449 PAQIVIARKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEE 508
Query: 695 XXXXXXXXXXXXDLNFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGRTLWWNP--NA 522
+ +F NP + G + DL++S L+ WVHH +HIL QGR W+N
Sbjct: 509 EGEEEEEAEGGRN-SFEENPDFEGIQVIDLVES-LSNWVHHVQHILSQGRCNWFNSIQKN 566
Query: 521 GMXXXXXXXXXXXXXXXXXXXXXPLFTSLSEDSRLEGMTAWSVRSSSSLTPERAVAALRS 342
PL T +SED ++ + W+ R SS+L P+ A+A L+S
Sbjct: 567 EEEEEEEDEEKDDSDYIEQEVGLPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLQS 626
Query: 341 NLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGPAQLPRPQDEYPIGPEVMEMADPTFAD 162
NLWPGA AF+ +G+K E YIGWG K+ P NY P P EYP GPE+ EM DP+ +
Sbjct: 627 NLWPGAYAFS-NGKKFENFYIGWGHKYSPDNYTPPVPPPVYQEYPSGPEITEMDDPSVEE 685
Query: 161 EEAYRIA 141
E+A+R A
Sbjct: 686 EQAFRAA 692
>UniRef50_Q5TD95 Cluster: OTTHUMP00000017070; n=3; Eutheria|Rep:
OTTHUMP00000017070 - Homo sapiens (Human)
Length = 469
Score = 112 bits (269), Expect = 1e-23
Identities = 51/103 (49%), Positives = 69/103 (66%)
Frame = -3
Query: 449 LFTSLSEDSRLEGMTAWSVRSSSSLTPERAVAALRSNLWPGAAAFATSGQKSECMYIGWG 270
L T +SED ++ + W+ R SS+L P+ A+A L+SNLWPGA AF+ +G+K E YIGWG
Sbjct: 344 LLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLQSNLWPGAYAFS-NGKKFENFYIGWG 402
Query: 269 LKFDPPNYGPAQLPRPQDEYPIGPEVMEMADPTFADEEAYRIA 141
K+ P NY P P EYP GPE+ EM DP+ +E+A+R A
Sbjct: 403 HKYSPDNYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAA 445
>UniRef50_UPI00015B5A88 Cluster: PREDICTED: similar to radial
spokehead; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to radial spokehead - Nasonia vitripennis
Length = 613
Score = 97.9 bits (233), Expect = 3e-19
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 3/106 (2%)
Frame = -3
Query: 449 LFTSLSEDS-RLEGMT-AWSVRSSSSLTPERAVAALRSNLWPGAAAFATSGQKSECMYIG 276
L T LSED+ + +T AW+ R SS+L P AVA +RSN+WPGA AF ++ +K +YIG
Sbjct: 484 LLTPLSEDAYNSDSVTPAWTARQSSTLQPHIAVALIRSNVWPGAFAF-SANKKFANLYIG 542
Query: 275 WGLKFDPPNYGPAQLPRPQDEY-PIGPEVMEMADPTFADEEAYRIA 141
WG K NY P +P Q+++ PIG E+ E+ +P+F +EEAYR A
Sbjct: 543 WGHKHHAYNYSPPAMPAMQEQHEPIGLEITEIQEPSFEEEEAYRAA 588
Score = 90.6 bits (215), Expect = 5e-17
Identities = 50/122 (40%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXX 699
TP QI VAR + TGNL+ +Q+F F G E+NYLRAQ+ARI A T VSP G++TF
Sbjct: 310 TPRQIVVARQIIYLFTGNLETPIQTFLLFPGNEKNYLRAQIARIGAATHVSPIGYFTFGD 369
Query: 698 XXXXXXXXXXXXXDLNFN-----PNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGRTLWW 534
+ N Y +KDL+D S++ W HH +IL QGR W
Sbjct: 370 REEEDEEIEEDEDEEETEGRVIVKNRHYEQPPLKDLIDPSMSSWCHHSPYILSQGRLEWL 429
Query: 533 NP 528
P
Sbjct: 430 AP 431
>UniRef50_Q01656 Cluster: Flagellar radial spoke protein 4; n=1;
Chlamydomonas reinhardtii|Rep: Flagellar radial spoke
protein 4 - Chlamydomonas reinhardtii
Length = 465
Score = 79.0 bits (186), Expect = 1e-13
Identities = 65/228 (28%), Positives = 96/228 (42%), Gaps = 2/228 (0%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXX 699
TP Q++ +R + +TG L + V ++P F G E NYLRA +ARI A T V+P ++
Sbjct: 235 TPAQVKASRRIKKLLTGRLTSHVSTYPAFPGNEANYLRALIARISAATVVAPSDLFSLND 294
Query: 698 XXXXXXXXXXXXXDLNFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGRTLWWNPNAG 519
++ P G M ++ T WVH H+ QGR
Sbjct: 295 ETGELERAE------DWEPPA---GREM-----AAPTAWVHVRPHLKSQGRC----EVHK 336
Query: 518 MXXXXXXXXXXXXXXXXXXXXXPLFTSLSEDSRLEG-MTAWS-VRSSSSLTPERAVAALR 345
L +L ED++L G AW+ + SS+S + LR
Sbjct: 337 RELPEDADEDEFYNEDELEEGPDLLAALEEDAQLPGEQAAWTPIYSSASEAVKTQAGGLR 396
Query: 344 SNLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGPAQLPRPQDEYPIG 201
S +WPGA G + C+Y+GWG+K P + P P E+ G
Sbjct: 397 SLVWPGAVC-GGRGSEWTCVYVGWGVKNAP--FVPLPPPPVAQEFAWG 441
>UniRef50_Q01657 Cluster: Flagellar radial spoke protein 6; n=1;
Chlamydomonas reinhardtii|Rep: Flagellar radial spoke
protein 6 - Chlamydomonas reinhardtii
Length = 459
Score = 70.1 bits (164), Expect = 7e-11
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYT 708
TP+QI+ +RL R +TG LDA V +FP F G E NYLRA +ARI A T P+GF+T
Sbjct: 215 TPEQIKASRLLRRYLTGRLDAPVSAFPAFPGNEANYLRALIARISAATVCCPRGFFT 271
Score = 50.4 bits (115), Expect = 6e-05
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -3
Query: 404 AWS-VRSSSSLTPERAVAALRSNLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGPAQLP 228
AWS V +S+S+T VA +RSN WPGA A +G+ MY+GWG+K + P P
Sbjct: 364 AWSPVFASASVTTRNQVAGVRSNRWPGAVC-ACAGRHFTSMYVGWGIKAG-GEWSPCPPP 421
Query: 227 RPQDEY 210
P ++
Sbjct: 422 PPVPQW 427
>UniRef50_UPI0000D9EEE3 Cluster: PREDICTED: similar to radial
spokehead-like 1; n=1; Macaca mulatta|Rep: PREDICTED:
similar to radial spokehead-like 1 - Macaca mulatta
Length = 410
Score = 69.7 bits (163), Expect = 9e-11
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 302 QKSECMYIGWGLKFDPPNYGPAQLPRP-QDEYPIGPEVMEMADPTFADEEAYRIA 141
QK E +YIGWG K+ P N+ PA LP P Q EYP GPE+MEM+DPT +E+A + A
Sbjct: 332 QKFENIYIGWGHKYSPENFNPA-LPAPIQQEYPSGPEIMEMSDPTVEEEQALKAA 385
>UniRef50_Q9W1D3 Cluster: CG3121-PA; n=2; Sophophora|Rep: CG3121-PA
- Drosophila melanogaster (Fruit fly)
Length = 708
Score = 67.7 bits (158), Expect = 4e-10
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = -3
Query: 449 LFTSLSEDSRLEGMTAWSVRSSSSLTPERA-VAALRSNLWPGAAAFATSGQKSECMYIGW 273
+ +S + D E +W R +S T ++ + ++SN+WPGA F + E +Y+GW
Sbjct: 575 ILSSCANDMNPEVPVSWLARMTSKYTNQKERMLVMQSNVWPGAYTFIFE-KTCESIYLGW 633
Query: 272 GLKFDPPNYGPAQLPRPQDEYPIGPE-VMEMADPTFADEEAYR 147
G K+ N LP Q+E+P PE +E DPT +EEAY+
Sbjct: 634 GHKYYARNIPFKHLPMVQEEFPHNPEDFVEANDPTVEEEEAYK 676
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFY 711
TP QI V+R + +TG+L+A+V S+P F G E++YLR + RI AGT ++P G+Y
Sbjct: 377 TPRQIVVSRQIKKFLTGDLEADVISYPCFPGKEKHYLRTLIGRITAGTYIAPVGYY 432
>UniRef50_A0CVW3 Cluster: Chromosome undetermined scaffold_3, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_3,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 457
Score = 64.1 bits (149), Expect = 5e-09
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFY 711
TPDQ++VAR TGNL+ E++++PPF G E++YL+AQL RI ++P+G Y
Sbjct: 199 TPDQVKVAREIKYVCTGNLNQELKTYPPFPGKEKHYLKAQLVRILHANLIAPKGLY 254
>UniRef50_Q4DHQ3 Cluster: Flagellar radial spoke protein-like,
putative; n=3; Trypanosoma|Rep: Flagellar radial spoke
protein-like, putative - Trypanosoma cruzi
Length = 587
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYT 708
TP+Q+ VAR R TG+L++ V + P F G E NYLRAQ+ARI V+P+ YT
Sbjct: 302 TPNQVIVARHIRRGFTGDLESSVDTHPHFPGKEMNYLRAQIARISCACRVAPRDMYT 358
>UniRef50_A0EBU2 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_88,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 443
Score = 58.4 bits (135), Expect = 2e-07
Identities = 63/252 (25%), Positives = 91/252 (36%), Gaps = 12/252 (4%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXX 699
TP QI V+R TGNL+A+V + P F G E++ L+AQ+ RI T P+G Y
Sbjct: 204 TPQQINVSRQIKYMFTGNLEADVITNPYFFGKEKHLLKAQIVRITQSTVRIPKGQYILRE 263
Query: 698 XXXXXXXXXXXXXDLNFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGRTLWWNPNAG 519
F H +K L D W+H +IL GR + P+
Sbjct: 264 GDPREIDQTPEYKLPGF--------HELKTLND-----WMHFNTNILNCGRLVHLIPSE- 309
Query: 518 MXXXXXXXXXXXXXXXXXXXXXPLFTSLSEDSRLEGMTAWSVRSSSSLTP---------- 369
LS D AW +R T
Sbjct: 310 -LPDGVEPDIYQKQIEAADPFENRLKQLSNDKLPNNKPAWKIRIVGDTTDYNPLAKDTNN 368
Query: 368 --ERAVAALRSNLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGPAQLPRPQDEYPIGPE 195
V ++S +WPG ++ S+ +Y G+G K ++ P Q PQ P+
Sbjct: 369 KVNNGVIIIKSLVWPGLVTVYSNKVLSQ-LYYGYGFKATTNHFYPKQ---PQQVQTEQPD 424
Query: 194 VMEMADPTFADE 159
+ E +P F E
Sbjct: 425 LPEQPEPNFPAE 436
>UniRef50_Q38J87 Cluster: Radial spoke head 1; n=2; Tetrahymena
thermophila|Rep: Radial spoke head 1 - Tetrahymena
thermophila
Length = 463
Score = 54.8 bits (126), Expect = 3e-06
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFY 711
TP Q+ AR TG+L+A V+S+P F G E++ L+AQ+ARI +SP+G Y
Sbjct: 210 TPQQVVAARQIKYIFTGDLNANVKSYPLFNGKEKHLLKAQIARISCACVLSPKGLY 265
>UniRef50_UPI0001509EA2 Cluster: hypothetical protein
TTHERM_00502580; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00502580 - Tetrahymena
thermophila SB210
Length = 505
Score = 54.0 bits (124), Expect = 5e-06
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = -3
Query: 875 PDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXXX 696
PD I AR +TG+L+A ++++P F G E+++L+AQL RI G+ ++P+G Y
Sbjct: 224 PDHIVQARQIKYLLTGDLNASLKTYPLFYGKEKHFLKAQLVRITFGSELAPKGLY----- 278
Query: 695 XXXXXXXXXXXXDLNFNPNPFYHGHSMKDLLD-SSLTYWVHHGRHILKQGRT 543
D+ PF + + + L+ WVH +LKQGRT
Sbjct: 279 ----RPPEEGENDIQLEDEPF----KLPEYTELQELSTWVHMHPPLLKQGRT 322
>UniRef50_A4I4B9 Cluster: Flagellar radial spoke protein-like,
putative; n=3; Leishmania|Rep: Flagellar radial spoke
protein-like, putative - Leishmania infantum
Length = 702
Score = 53.2 bits (122), Expect = 8e-06
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = -3
Query: 878 TPDQIRVARLTVRC-MTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYT 708
+P I VAR +RC TGNLDA V P F G E++YLRAQ+ARI + ++P +T
Sbjct: 391 SPHHITVAR-ALRCRFTGNLDAPVHGHPRFMGCEKHYLRAQIARITSACRIAPVQTFT 447
>UniRef50_Q4QGB1 Cluster: Flagellar radial spoke protein, putative;
n=6; Trypanosomatidae|Rep: Flagellar radial spoke
protein, putative - Leishmania major
Length = 591
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQG 717
TP QI AR T R TG+L A V + P+ E YLRAQLARI + T+++PQG
Sbjct: 252 TPQQINAARETKRFFTGDLSASVAATFPWG--EAAYLRAQLARITSSTTIAPQG 303
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = -3
Query: 410 MTAWSVRSSSSLTPERAVAALRSNLWPGAAAFATSGQKS-ECMYIGWGLKFDPPNYGPAQ 234
+ W++R ++++ +A ++S WPGA A+A G K C+Y G G+K + P
Sbjct: 483 IACWTMRVENNVSKAHRMAVVQSLRWPGATAYAAEGGKRWSCVYFGNGMKKTDAAFTPPP 542
Query: 233 LPRPQDEYPIGPEVMEMADPTFADEEAYR 147
P Q E +V E+ DPT E+ R
Sbjct: 543 APPVQSEC---ADVTEVEDPTATVEKLVR 568
>UniRef50_A0CN27 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 458
Score = 50.0 bits (114), Expect = 8e-05
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 4/239 (1%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTFXX 699
T Q+ +R +GNL+ E+ +P F+G E++ L+AQ+ RI ++P+G Y +
Sbjct: 206 TRKQMEASRYITYVFSGNLNKEISQYPRFDGKEKHLLKAQILRITHANLLAPKGLYRY-- 263
Query: 698 XXXXXXXXXXXXXDLNFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGR-TLWWNPNA 522
+ F + F S + S++ WVH +ILKQGR T + +P+
Sbjct: 264 --------DEDTKQITFE-DEFKMPESAE---LSTMDGWVHLPPNILKQGRITFYEDPSL 311
Query: 521 GMXXXXXXXXXXXXXXXXXXXXXPLFTSLSEDS---RLEGMTAWSVRSSSSLTPERAVAA 351
+E + ++ G T + L +
Sbjct: 312 KEEELNQMKEADPELERLKSIKDDKPFEQNEGNWNIKIFGETQ-QYTNQEELPLSYQIVL 370
Query: 350 LRSNLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGPAQLPRPQDEYPIGPEVMEMADP 174
LR+ LWPGA + S +Y G+G K ++ P P E P ++ E+ +P
Sbjct: 371 LRNYLWPGAITVSNSSDFIS-IYFGYGNKNQQNSFNPL-APNDVQEEP--EDIDEIPEP 425
>UniRef50_Q8IIV6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 643
Score = 46.4 bits (105), Expect = 0.001
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFY 711
TP I +A + +TG+++ ++ SFP E++YLRA ++ I + T +SPQ ++
Sbjct: 361 TPKYIEIASQMNKMLTGHMNEKINSFPNLSIKEKHYLRALISIISSSTHISPQNYF 416
>UniRef50_A2D924 Cluster: RSHL1 protein, putative; n=1; Trichomonas
vaginalis G3|Rep: RSHL1 protein, putative - Trichomonas
vaginalis G3
Length = 487
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = -3
Query: 449 LFTSLSEDSRL-EGMTAWSVRSSSSLTPERAVAALRSNLWPGAAAFATSGQKSECMYIGW 273
LF +++D E AW+ ++ +S + S WPGA T G+KS +Y+G
Sbjct: 372 LFGGINDDEGFGEEQPAWNFKTVTSPIAGESFVVAESLRWPGAYNL-TDGKKSCSIYMGT 430
Query: 272 GLKFDPPNYGPAQLPRPQDEYPIGPEVMEMADPTFADEE 156
G KF + P P EY + ++ E DPT +E+
Sbjct: 431 GTKFIVDGFQPPSPPPMAGEYRL--KMTEKIDPTLDEEK 467
Score = 41.5 bits (93), Expect = 0.027
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = -3
Query: 875 PDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGF 714
P I +R ++G+ A V+SF PF+ TE Y+RA +ARI + +P G+
Sbjct: 201 PSDIVTSRKVTWQISGDFSAAVRSFVPFDVTEDIYIRALIARISSACIAAPTGY 254
>UniRef50_A5K470 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 630
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/56 (33%), Positives = 37/56 (66%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFY 711
TP+ I++A T + +TG+++ + +FP E++YLRA ++ I + T +SP+ +Y
Sbjct: 324 TPEYIQMASRTNKMLTGHMNKIITAFPNIAIKEKHYLRALISLISSYTHISPRRYY 379
>UniRef50_Q7RM02 Cluster: Drosophila melanogaster GH13165p; n=4;
Plasmodium (Vinckeia)|Rep: Drosophila melanogaster
GH13165p - Plasmodium yoelii yoelii
Length = 446
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPPFEGTERNYLRAQLARIQAGTSVSPQGFYTF 705
TP+ I + +TGN++ + SFP + E++YLRA ++ I + T +SP+ ++ F
Sbjct: 186 TPEYIEKTNKINKMLTGNINHIITSFPNIQIKEKHYLRALISIISSYTCISPKNYFIF 243
>UniRef50_Q7R281 Cluster: GLP_422_71304_68782; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_422_71304_68782 - Giardia lamblia
ATCC 50803
Length = 840
Score = 41.5 bits (93), Expect = 0.027
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = -3
Query: 878 TPDQIRVARL---TVRCMTGNLDAEVQ-SFPPFEGTERNYLRAQLARIQAGTSVSPQGFY 711
TP+Q+RVA L + TGNL V S P F+G E + LR +ARIQ ++ P Y
Sbjct: 374 TPEQVRVASLLPASSLMFTGNLQRTVNTSLPRFDGKESHLLRCVIARIQHECTIVPNKMY 433
>UniRef50_A2FYS6 Cluster: Flagellar radial spoke protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Flagellar radial
spoke protein, putative - Trichomonas vaginalis G3
Length = 512
Score = 41.5 bits (93), Expect = 0.027
Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 3/227 (1%)
Frame = -3
Query: 878 TPDQIRVARLTVRCMTGNLDAEVQSFPP-FEGTERNYLRAQLARIQAGTSVSPQGFYTFX 702
TP QI+ +R + +G + + F+G E LR ++R+ +++P+G Y
Sbjct: 248 TPAQIQGSRCIRQMFSGTEKGPIAAPEGRFQGGEYELLRCFISRVTHSCTLAPKGLYNLE 307
Query: 701 XXXXXXXXXXXXXXDLNFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILKQGRTLWWNPNA 522
N P K L L +VH IL QGR ++
Sbjct: 308 EEPEEGGRVE------NVTPIAMAEEPEYKPL--EGLKSFVHCVPTILDQGRCEFY---- 355
Query: 521 GMXXXXXXXXXXXXXXXXXXXXXPLFTSLSEDSRLEGMTAWSVRSSSSLTPERAVAALRS 342
+ P+ T ++ED + WS+R + ++ LRS
Sbjct: 356 -IFEEDQQDEEGNEKEPVVEHGPPILTPITEDKSKDEYKCWSLREVNGVSKRYW---LRS 411
Query: 341 NLWPGAAAFAT-SGQKSECMYIGWGLKFDPP-NYGPAQLPRPQDEYP 207
N+WPG + +G + MY G G+K P + P + +P P
Sbjct: 412 NVWPGLHIVSNENGSRMVMMYFGTGMKAQKPLEWPPLPVKKPPPPPP 458
>UniRef50_Q5TP17 Cluster: ENSANGP00000027464; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000027464 - Anopheles gambiae
str. PEST
Length = 528
Score = 38.7 bits (86), Expect = 0.19
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 368 ERAVAALRSNLWPGAAAFATSGQKSECMYIGWGLKFDPPNYGP-AQLPRPQDEY 210
E+A+ S WPG F G++ C Y+GWGL+ Y P ++P+ EY
Sbjct: 444 EQALQYWLSETWPGLCTF-NDGEQFRCFYVGWGLERRTNWYCPIVRIPKMAREY 496
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 836 MTGNLDAEV-QSFPPFEGTERNYLRAQLARIQA 741
+ GNLDA V Q PF+G E+N LRA + +I +
Sbjct: 366 LQGNLDAPVPQIVKPFDGVEKNLLRALVCKISS 398
>UniRef50_UPI0000383E76 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Magnetospirillum magnetotacticum
MS-1|Rep: COG0513: Superfamily II DNA and RNA helicases
- Magnetospirillum magnetotacticum MS-1
Length = 255
Score = 37.1 bits (82), Expect = 0.59
Identities = 29/87 (33%), Positives = 36/87 (41%)
Frame = +3
Query: 222 RPRQLSRPVVRRIELQAPTDVHTFXXXXXXXXXXXXXPQVAPERGDRSLRRQRRTAADTP 401
RPR+ RP RR E AP++V + PER +R R R D P
Sbjct: 117 RPRRERRP--RRDETPAPSEVEALPVEAVAVEAIEQPREERPERAERPRGRGRDRDRDEP 174
Query: 402 RRHTFEPRVFRQRREERGTTLGLQRGR 482
RR PR R+ R G +RGR
Sbjct: 175 RRDA-APREDRRPSRGRDDRGGRRRGR 200
>UniRef50_Q7QWD8 Cluster: GLP_336_40147_37625; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_40147_37625 - Giardia lamblia
ATCC 50803
Length = 840
Score = 37.1 bits (82), Expect = 0.59
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 869 QIRVARLTVRCMTGNLDAEVQS-FPPFEGTERNYLRAQLARIQAGTSVSP 723
Q++++R ++GNL + PPF G E +YLR + RI+ G ++P
Sbjct: 306 QLKLSRFINVRLSGNLSRRIYDRIPPFPGCEAHYLRCIITRIKHGAELAP 355
>UniRef50_Q381C2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 775
Score = 34.3 bits (75), Expect = 4.2
Identities = 26/89 (29%), Positives = 35/89 (39%)
Frame = +3
Query: 186 LHDLRPDGVLVLRPRQLSRPVVRRIELQAPTDVHTFXXXXXXXXXXXXXPQVAPERGDRS 365
LHDLR L+ + P +++ P D +TF V ER D
Sbjct: 15 LHDLRHQQELLEKELSAVHPTPETLQMPEPVDANTFQSQTADFHNTRAISPV--ERLDEI 72
Query: 366 LRRQRRTAADTPRRHTFEPRVFRQRREER 452
RR RR A T +R+ FR +E R
Sbjct: 73 RRRHRREAHRTMQRYFSALNNFRDYQERR 101
>UniRef50_Q6ZFH8 Cluster: Putative uncharacterized protein
OJ1506_F01.24; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1506_F01.24 - Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 33.5 bits (73), Expect = 7.3
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +3
Query: 351 RGDRSLRRQRRTAADTP--RRHTFEPRVFRQRREERGTT--LGLQR 476
RGD L R+RR A P RR T V R+R+E RG T LG +R
Sbjct: 128 RGDARLLRERRAARAAPGMRRRTGRTIVGRKRKENRGETDILGARR 173
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,468,169
Number of Sequences: 1657284
Number of extensions: 11282507
Number of successful extensions: 33205
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 31885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33169
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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