Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10e01
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       25   4.0  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   4.0  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    25   4.0  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   4.0  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   4.0  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   7.1  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   7.1  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   9.3  

>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 269 LKFDPPNYGPAQLPRPQDEYPIGPEVMEMA 180
           L+F  PN    Q PRPQ   P  P  M+ A
Sbjct: 83  LRFPAPNQNEQQQPRPQP--PKTPGAMQFA 110


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 653 NFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILK 555
           N NPN       M  ++ S++ YWV   +H+++
Sbjct: 312 NGNPNGLTRKQEM--MVRSAIKYWVERHKHVVR 342


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 653 NFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILK 555
           N NPN       M  ++ S++ YWV   +H+++
Sbjct: 165 NGNPNGLTRKQEM--MVRSAIKYWVERHKHVVR 195


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 653 NFNPNPFYHGHSMKDLLDSSLTYWVHHGRHILK 555
           N NPN       M  ++ S++ YWV   +H+++
Sbjct: 312 NGNPNGLTRKQEM--MVRSAIKYWVERHKHVVR 342


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = +3

Query: 333 PQVAPERGDRS--LRRQRRTAADTPRRHTFEPRVFRQR----REERGTTL 464
           P V P+  + S  L R  R A D P  +T   RV  QR    RE+ G +L
Sbjct: 158 PAVFPQLREESNLLDRGNRRAIDIPSNYTASDRVDEQRVAYWREDIGLSL 207


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 656 LNFNPNPFYHGHSMKDLLDSSL 591
           L+F PNP Y+G+    L  ++L
Sbjct: 239 LHFGPNPSYNGYPTATLTKNAL 260


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 656 LNFNPNPFYHGHSMKDLLDSSL 591
           L+F PNP Y+G+    L  ++L
Sbjct: 239 LHFGPNPSYNGYPTATLTKNAL 260


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 728 TRTCRLGSELVERADNSAL 784
           +RTC  G EL++ ADN  L
Sbjct: 133 SRTCPKGLELLQLADNLGL 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,889
Number of Sequences: 2352
Number of extensions: 11945
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)