Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d22
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine aminope...    61   1e-09
Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical pr...    48   1e-05
Z71186-3|CAA94914.1|  222|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U00040-5|AAA50666.1|  934|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>L15313-6|AAA28198.1|  491|Caenorhabditis elegans Leucine
           aminopeptidase protein 1 protein.
          Length = 491

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 9/210 (4%)
 Frame = -1

Query: 775 GKGVTFDSGSLDLKSPKDLRYMKGDMAGAGCILAITRTAARLKLPINIRGILPLCE--LM 602
           GKGV +D+G L +K+   +  MK DM GA  +L       +      +   L + E  + 
Sbjct: 251 GKGVVYDTGGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHGFSQTLHACLCIVENNVS 310

Query: 601 PNGNSPKFGDVAYSANGKSLHIRLPSREGRLLIADSLVYAR-NYWPKLIIDIGTMSKELI 425
           P  N P   D+    +GK++ I     EGRL++AD + YA+       I D+ T++    
Sbjct: 311 PIANKP--DDIIKMLSGKTVEINNTDAEGRLILADGVFYAKETLKATTIFDMATLTGAQA 368

Query: 424 YTLDGSACG-CYTNSDELFCYLQSASSQTGDRIWRMPLWK--FYEDRVRDCHTADVANTG 254
           + L G   G   TN ++L   +  A   +GD +  M      F+ D          +N G
Sbjct: 369 W-LSGRLHGAAMTNDEQLENEIIKAGKASGDLVAPMLFAPDLFFGDLKSSIADMKNSNLG 427

Query: 253 RDEFGDSPNCAAFLKQFIC---DTKWVHLD 173
           + +   S     F+   I      +W+HLD
Sbjct: 428 KMDGPPSAVAGLFIGAHIGFGEGLRWLHLD 457


>Z78018-4|CAB01448.1|  522|Caenorhabditis elegans Hypothetical
           protein W07G4.4 protein.
          Length = 522

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
 Frame = -1

Query: 775 GKGVTFDSGSLDLKSPKDLRYMKGDMAGAGCILAITRTAARLKLPINIRGILPLCELMPN 596
           GKGVT D+G  DLK+   +  M  D  G+  +    +    LK P NI+ +  +C +  +
Sbjct: 270 GKGVTIDTGGCDLKTGGHMFGMCRDKYGSAVVGGFFKAIDVLK-PKNIKAVGYMCMVRNS 328

Query: 595 GNSPKF--GDVAYSANGKSLHIRLPSREGRLLIADSLVYAR 479
             S  +   +V  S +GK +HI     EGRL + D L  A+
Sbjct: 329 IGSHAYTCDEVITSRSGKRIHIYNTDAEGRLTMLDPLTLAK 369


>Z71186-3|CAA94914.1|  222|Caenorhabditis elegans Hypothetical
           protein F23D12.4 protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -1

Query: 463 LIIDIGTMSKELIYTLDGSACGCYTNSDELF-CYLQSASSQTGDRIWRMP 317
           +I+DI  +   L   +D  A     NSDE+F C +   S  +  +IW  P
Sbjct: 162 VILDIINLVNHLKIKMDTLAVAGKNNSDEVFKCIIDEVSRVSSLQIWGFP 211


>U00040-5|AAA50666.1|  934|Caenorhabditis elegans Hypothetical
           protein C18H2.4 protein.
          Length = 934

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +1

Query: 289 LLDLRKISIMAFAKSYHRSDYSLIEGSKTIH 381
           L+ + + S +AF +SYH+S +  IE SK +H
Sbjct: 322 LMKILEESWIAFERSYHQSKHVGIELSKLVH 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,663,315
Number of Sequences: 27780
Number of extensions: 409978
Number of successful extensions: 892
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)