Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d16
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.54 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.0  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   5.0  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   5.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.8  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 475 PPC-PAVLVVPSVLARIDNTRLPTE-PLRQVLYM 570
           PPC PAV V+P      D T +P + P + V  M
Sbjct: 161 PPCDPAVCVLPDCFCSEDGTTIPGDLPSKDVPQM 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 465 PLGPSMPGGPCGPLGP 512
           P  PSM GG C P  P
Sbjct: 471 PWKPSMHGGVCDPYTP 486


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 785 WQEMCPTDTAGYCRTSSTCA 726
           W+E C      YC   ++CA
Sbjct: 471 WKEKCDIKGQPYCSLPNSCA 490


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 785 WQEMCPTDTAGYCRTSSTCA 726
           W+E C      YC   ++CA
Sbjct: 478 WKEKCDIKGQPYCSLPNSCA 497


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 151 SMVKGDNDLEDLPLGLMDDM 92
           + +KG  D EDLPL +  +M
Sbjct: 372 NFIKGVVDSEDLPLNISREM 391


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 759 RWLLQNXFHLCAPPLDAT 706
           +W+ +N  H C  P + T
Sbjct: 170 KWVQENVIHFCGDPNNVT 187


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 759 RWLLQNXFHLCAPPLDAT 706
           +W+ +N  H C  P + T
Sbjct: 170 KWVQENIIHFCGDPNNVT 187


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 759 RWLLQNXFHLCAPPLDAT 706
           +W+ +N  H C  P + T
Sbjct: 170 KWVQENVIHFCGDPNNVT 187


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 759 RWLLQNXFHLCAPPLDAT 706
           +W+ +N  H C  P + T
Sbjct: 170 KWVQENIIHFCGDPNNVT 187


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 759 RWLLQNXFHLCAPPLDAT 706
           +W+ +N  H C  P + T
Sbjct: 169 KWVQENVIHFCGDPNNVT 186


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 516 SEDRGDHKDRRAWRDPKVILERED 445
           S+ RG H   R+ R PK    RED
Sbjct: 204 SQSRGRHNQSRSKRQPKT--GRED 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,231
Number of Sequences: 336
Number of extensions: 3628
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)