Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d15
(839 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB... 83 6e-15
UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p... 69 2e-10
UniRef50_Q8IHD6 Cluster: AT12234p; n=3; Sophophora|Rep: AT12234p... 62 2e-08
UniRef50_Q0LGA3 Cluster: Membrane-bound mannosyltransferase-like... 39 0.14
UniRef50_Q6C5F7 Cluster: Yarrowia lipolytica chromosome E of str... 38 0.31
UniRef50_Q9I7U4-3 Cluster: Isoform B of Q9I7U4 ; n=6; Sophophora... 38 0.41
UniRef50_Q9I7U4 Cluster: Titin; n=7; Endopterygota|Rep: Titin - ... 38 0.41
UniRef50_Q7YRF6 Cluster: Cardiac titin; n=4; Eutheria|Rep: Cardi... 36 1.7
UniRef50_Q7M8U2 Cluster: PUTATIVE FERROUS IRON TRANSPORT PROTEIN... 35 2.9
UniRef50_A7CWD9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.9
UniRef50_Q9VR26 Cluster: CG3294-PA, isoform A; n=4; Sophophora|R... 34 3.9
UniRef50_Q61N21 Cluster: Putative uncharacterized protein CBG082... 34 3.9
UniRef50_Q4DPB5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_A2DQ88 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q0HEB6 Cluster: Putative uncharacterized protein; n=4; ... 34 5.1
UniRef50_A4RW60 Cluster: Predicted protein; n=1; Ostreococcus lu... 34 5.1
UniRef50_Q4DMS1 Cluster: Putative uncharacterized protein; n=4; ... 34 5.1
UniRef50_Q17AF2 Cluster: Myosin light chain kinase; n=1; Aedes a... 34 5.1
UniRef50_Q0W0Q0 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q4PAH6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_P25907 Cluster: Uncharacterized protein ydbD; n=16; Ent... 33 8.9
UniRef50_Q8WZ42 Cluster: Titin; n=65; Eukaryota|Rep: Titin - Hom... 33 8.9
>UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG31025-PB, isoform B - Tribolium castaneum
Length = 1307
Score = 83.4 bits (197), Expect = 6e-15
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Frame = -1
Query: 794 PKMGWLWNAADTP--GAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 621
P+MGWLWN TP KPRRGW+PG I K VA+ + +
Sbjct: 1097 PRMGWLWNIF-TPCLNLKPRRGWRPGAIAKIVAERIR----KHREAQGLQMLELRDFRRG 1151
Query: 620 XXXXXXGDSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKI 441
+S ++PKP L +++ + I +NPLKD + NE PY+DC P+ FKI
Sbjct: 1152 KKGGGAYESGTSINIQPKPTLHIKKHDGCYWITMNPLKDPHTLVENESPYMDCTPMQFKI 1211
Query: 440 IKKRSPEEQAK 408
+K + E+ K
Sbjct: 1212 VKNKKEGEEYK 1222
Score = 35.1 bits (77), Expect = 2.2
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 233 CICHEESLSS-LSSNATWDIEYTPPFGCFDLAPRKR-RMCIHVETQYIPAD 87
C C E + SS++ +IE+TPP G KR R +H +TQY+ D
Sbjct: 1224 CFCGEGEVGEESSSDSELEIEFTPPAGIIHPERFKRKRNVVHCDTQYLATD 1274
>UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p -
Drosophila melanogaster (Fruit fly)
Length = 998
Score = 68.5 bits (160), Expect = 2e-10
Identities = 64/240 (26%), Positives = 94/240 (39%), Gaps = 6/240 (2%)
Frame = -1
Query: 788 MGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXXXXXX 609
MGWLW A KP GW+PG I +S+ +M++ +
Sbjct: 607 MGWLWTAHPLAN-KP--GWRPGAIRRSIRGLMSYFL-KDFPVDNVPVSKYMSYYKHKMSP 662
Query: 608 XXGDSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKR 429
E E L P L +++K DV+TI + PLKD +A + +PYV P+ F+I+K
Sbjct: 663 MSPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKTLARSANPYVRMKPVQFRIVK-- 720
Query: 428 SPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDICKC--AYMDVYCNDLTAIDKVI--- 264
+P LK+ RD +++ L C C M+ YC +++
Sbjct: 721 NP------------LLKEIRD--LKRCLKGMGFSKCSCHKPLMNCYCRSFVDKKRLLYHV 766
Query: 263 -DSCPAFKEPECICHEESLSSLSSNATWDIEYTPPFGCFDLAPRKRRMCIHVETQYIPAD 87
C K C + S +D TPP G K H ETQY +D
Sbjct: 767 RRECERRKIDSCEDELVLTDTSDSEDEFDFGVTPPAGLMRPERLKSSHVKHTETQYNESD 826
>UniRef50_Q8IHD6 Cluster: AT12234p; n=3; Sophophora|Rep: AT12234p -
Drosophila melanogaster (Fruit fly)
Length = 905
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/118 (28%), Positives = 53/118 (44%)
Frame = -1
Query: 788 MGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXXXXXX 609
MGW+W ++ K W+PG I + + ++M++
Sbjct: 601 MGWMWTKSEMARHK---SWRPGAISRPIRQLMSY-----FLKDFPADNICLSRYHYRHKK 652
Query: 608 XXGDSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIK 435
E +EPL P L + RKGD + I + PLKD +A + +PY D P+VF+I K
Sbjct: 653 CRRVEELEEPLVQHPTLHISRKGDEYIITLRPLKDPKALASSANPYADMKPVVFRITK 710
>UniRef50_Q0LGA3 Cluster: Membrane-bound mannosyltransferase-like;
n=1; Herpetosiphon aurantiacus ATCC 23779|Rep:
Membrane-bound mannosyltransferase-like - Herpetosiphon
aurantiacus ATCC 23779
Length = 764
Score = 39.1 bits (87), Expect = 0.14
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = -2
Query: 247 LKNQSVYATRNH*VHCPVTRLGTLSIPHLLA--VSIW-RQGKEECVYTWRRSIYQPTLES 77
+KNQ++Y +H P+T L L++ L+A V IW +GK++ W+R++ Q S
Sbjct: 233 VKNQTLYGNNGVFMHMPITALTLLTLVFLIAVIVIIWFYKGKDQTQTMWKRAVSQAPERS 292
Query: 76 LM 71
L+
Sbjct: 293 LL 294
>UniRef50_Q6C5F7 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 469
Score = 37.9 bits (84), Expect = 0.31
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -1
Query: 560 LKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKL 381
LK + + + IQ++ + TEI N+ P D D + K+ + SPE Q VE+ K+
Sbjct: 354 LKKESEEENEQIQLHAVDPNTEIVVNQPPQDDADAM--KVFGELSPEMQKAVESGKL--- 408
Query: 380 KKQRDAEIRKALAE-AVEDICKCAYMDVYCNDLTAIDKVIDS 258
EI K LA +VED K M C L +K+ D+
Sbjct: 409 -----EEINKVLANYSVEDAEKVLRMFDECGILAVEEKIYDA 445
>UniRef50_Q9I7U4-3 Cluster: Isoform B of Q9I7U4 ; n=6; Sophophora|Rep:
Isoform B of Q9I7U4 - Drosophila melanogaster (Fruit fly)
Length = 17903
Score = 37.5 bits (83), Expect = 0.41
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = -1
Query: 593 EPDEPLEPKPALKVQRKGDVFTIQVN---PLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 423
E +EP+E KP K+ +V + + +K+ P E P+ + L + KR P
Sbjct: 13605 ETEEPIEDKPVEKISEYSEVDSDEPKLTVAVKEFIPEKPEEKPF-EIVVLEETVESKREP 13663
Query: 422 EEQAKVEARKMVKLKKQRDAEIRKALAEAVEDICKCAYMDVYCNDLTAIDKVIDSCPAFK 243
+E+ KV K+VK KK + + E V DI + D + +T V P
Sbjct: 13664 DEEGKVR-EKVVKTKKIKQ---NRGSVEVVHDIVEEIDTDTNESVITVTTTVPTETPDQD 13719
Query: 242 EP 237
+P
Sbjct: 13720 QP 13721
>UniRef50_Q9I7U4 Cluster: Titin; n=7; Endopterygota|Rep: Titin -
Drosophila melanogaster (Fruit fly)
Length = 18074
Score = 37.5 bits (83), Expect = 0.41
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Frame = -1
Query: 593 EPDEPLEPKPALKVQRKGDVFTIQVN---PLKDLTEIAPNEDPYVDCDPLVFKIIKKRSP 423
E +EP+E KP K+ +V + + +K+ P E P+ + L + KR P
Sbjct: 13916 ETEEPIEDKPVEKISEYSEVDSDEPKLTVAVKEFIPEKPEEKPF-EIVVLEETVESKREP 13974
Query: 422 EEQAKVEARKMVKLKKQRDAEIRKALAEAVEDICKCAYMDVYCNDLTAIDKVIDSCPAFK 243
+E+ KV K+VK KK + + E V DI + D + +T V P
Sbjct: 13975 DEEGKVR-EKVVKTKKIKQ---NRGSVEVVHDIVEEIDTDTNESVITVTTTVPTETPDQD 14030
Query: 242 EP 237
+P
Sbjct: 14031 QP 14032
>UniRef50_Q7YRF6 Cluster: Cardiac titin; n=4; Eutheria|Rep: Cardiac
titin - Canis familiaris (Dog)
Length = 2200
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = -1
Query: 509 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEA 336
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK KA+ EA
Sbjct: 1074 KKVRKLLPEPKPQPKEEVVLKSVLRKRPEEEEPKVEPKKLEKIKKPVPEPPPKAVEEA 1131
>UniRef50_Q7M8U2 Cluster: PUTATIVE FERROUS IRON TRANSPORT PROTEIN B;
n=1; Wolinella succinogenes|Rep: PUTATIVE FERROUS IRON
TRANSPORT PROTEIN B - Wolinella succinogenes
Length = 759
Score = 34.7 bits (76), Expect = 2.9
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = -1
Query: 482 EDPYVDCDPLVFKIIKKRSPEEQAKVE--ARKMVKLKKQRDAEIR 354
++ Y +PL FKI++ RS +E AKVE R+++ +K E++
Sbjct: 547 DEKYAQIEPLFFKIVRDRSDKEAAKVERALRQIISARKTLFREVK 591
>UniRef50_A7CWD9 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 333
Score = 34.7 bits (76), Expect = 2.9
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -2
Query: 241 NQSVYATRNH*VHCPVTRLGTLSIPHLLAVSIWRQGKEE 125
+QSV+ N HCP++ LG L++PHLL V+ R+ E
Sbjct: 262 HQSVHVHANG--HCPISWLGELALPHLLEVTYVRRADYE 298
>UniRef50_Q9VR26 Cluster: CG3294-PA, isoform A; n=4; Sophophora|Rep:
CG3294-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 446
Score = 34.3 bits (75), Expect = 3.9
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1
Query: 434 KRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDICKCAYMDVYCND 288
+R EQAK A + + +KQR+ E RKA A E MD Y N+
Sbjct: 99 ERLQREQAKERAEREERQRKQREEETRKAAKAAAEFDAMMESMDEYLNN 147
>UniRef50_Q61N21 Cluster: Putative uncharacterized protein CBG08234;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG08234 - Caenorhabditis
briggsae
Length = 2147
Score = 34.3 bits (75), Expect = 3.9
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = -1
Query: 596 SEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYV--DCDPLVFKIIKKRSP 423
+ P PL+ P + ++ G + + V P++ +T + PN+ P V +PL +++S
Sbjct: 1063 ANPMHPLQGGPLQQHRQAGPMRPLHVGPMQQITAVYPNQRPLVRQARNPLPITAPQEQSS 1122
Query: 422 EEQAK---VEARKMVKLKKQRDAEIRKALAEAVED 327
+K + +K K K + D + +AE E+
Sbjct: 1123 SSSSKKDETQNKKKDKKKTKLDKSAKTNVAEKQEE 1157
>UniRef50_Q4DPB5 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 558
Score = 34.3 bits (75), Expect = 3.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 394 FRASTFACSSGLRFLIILNTKGSQSTYGSSFGAI-----SVRSFNGLTCIVKTSPFLCTF 558
F A++F+ + F ++L KG + Y ++F + SF+ L+C +T+P +CT
Sbjct: 204 FTAASFSSMTVTYFTLLLTLKGIKDVYSTNFPLLYPDLYPAASFSTLSCSNETTPIVCTL 263
Query: 559 K 561
+
Sbjct: 264 R 264
>UniRef50_A2DQ88 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1143
Score = 34.3 bits (75), Expect = 3.9
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = -1
Query: 524 QVNPLKDLTEIAPNEDPYVDC--DPLVFKIIKKR-SPEEQAKVEARKMVK-LKKQRDAEI 357
QVN LK L E+ PNED +D D +I K R + EE+ + + RK K +K+R+ E
Sbjct: 393 QVNFLKKLNEMIPNEDIVIDLTNDEEDEEIEKNRKAAEERKRKDERKRKKEEEKKREEEE 452
Query: 356 RKALAE 339
RK E
Sbjct: 453 RKKQQE 458
>UniRef50_Q0HEB6 Cluster: Putative uncharacterized protein; n=4;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella sp. (strain MR-4)
Length = 462
Score = 33.9 bits (74), Expect = 5.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 230 ICHEESLSSLSSNATWDIEYTPPFGCFDLAPRKRRMCIHVETQY 99
+CHE +LS +N WD Y F + L ++ ++ H + +Y
Sbjct: 81 VCHESALSPYLANGLWDAGYDENFQIYQLKKQQIKLDYHDDLRY 124
>UniRef50_A4RW60 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 950
Score = 33.9 bits (74), Expect = 5.1
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -1
Query: 509 KDLTEI--APNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKAL 345
KD+ E+ AP + V + +I + E+ K E MVK+ +QRDAE+R++L
Sbjct: 541 KDIVEVYEAPAVEVVVADERYADQIRRLSEEVERMKTEQASMVKMTEQRDAELRQSL 597
>UniRef50_Q4DMS1 Cluster: Putative uncharacterized protein; n=4;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1735
Score = 33.9 bits (74), Expect = 5.1
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = -3
Query: 411 ESGSTEDGQAEEAARRRNPKGPGRSRRRHLQMCLYGCLL**SNCHR*GYRQLSSL*RTRV 232
E G E+G E +P+G SRR L+ L G L +C R G LSSL +RV
Sbjct: 185 EEGEKEEGDTNEG---EDPRGKSSSRRAALRDALIGYALDALSCKR-GAEALSSLLSSRV 240
Query: 231 YMP 223
+P
Sbjct: 241 LIP 243
>UniRef50_Q17AF2 Cluster: Myosin light chain kinase; n=1; Aedes
aegypti|Rep: Myosin light chain kinase - Aedes aegypti
(Yellowfever mosquito)
Length = 4604
Score = 33.9 bits (74), Expect = 5.1
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = -1
Query: 524 QVNPLKDLTEIAPNEDPYV-DCDPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDA-EIRK 351
+V +++ ++ PYV D KI+++ SPEE+ K +K+VK KK+ D EI K
Sbjct: 2582 EVEEVEESIKLQAKPQPYVTDEAEASLKIVREASPEEKPK---KKVVKKKKEDDVDEITK 2638
Query: 350 ALAE 339
L E
Sbjct: 2639 KLLE 2642
>UniRef50_Q0W0Q0 Cluster: Putative uncharacterized protein; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
uncharacterized protein - Uncultured methanogenic
archaeon RC-I
Length = 156
Score = 33.9 bits (74), Expect = 5.1
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = -1
Query: 452 VFKIIKKR---SPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDICKCAYMDVYCNDLT 282
VF+I+KK+ +PEEQ + + + KK+R E+ +A A +D+ + +++ N +
Sbjct: 47 VFEILKKKGNLTPEEQEEADRTAALLQKKRR--ELVSTIATA-QDMTQREAEELF-NTIL 102
Query: 281 AIDKVIDSCPAFKEPECICHEES 213
ID+ +D+ EP EE+
Sbjct: 103 GIDRALDTLYRIHEPRSSAQEEA 125
>UniRef50_Q4PAH6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 958
Score = 33.1 bits (72), Expect = 8.9
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -3
Query: 537 RFHYTG*SIERSDRDSTERGSIC*LRSFSI*DYQEAQPRGASESGSTEDGQAEE-AARRR 361
R G + ER+ D+ G + D +EA ASE + +E AA +
Sbjct: 798 RERLAGSAAERTAEDTIRAGGYIESSQATRQDVEEATANSASEHPTVPTVASENVAAPTQ 857
Query: 360 NPKGPGRSRRRHLQMCLYGCL 298
R HLQMCL GC+
Sbjct: 858 QTNADTYDRLTHLQMCLIGCV 878
>UniRef50_P25907 Cluster: Uncharacterized protein ydbD; n=16;
Enterobacteriaceae|Rep: Uncharacterized protein ydbD -
Escherichia coli (strain K12)
Length = 768
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 76 TIPASAGIYCVSTCIHILLFLGAKSKQPKGGVYSM--SQVALLDNELSDSSWHIHSGSL 246
++P A + CV+ + I F A + + K V S V L+ LS S+W +H G L
Sbjct: 19 SLPVQAELRCVANAVDIESFFSAATAEDKQQVEQAINSSVNLVPFGLSASNWKVHRGDL 77
>UniRef50_Q8WZ42 Cluster: Titin; n=65; Eukaryota|Rep: Titin - Homo
sapiens (Human)
Length = 34350
Score = 33.1 bits (72), Expect = 8.9
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = -1
Query: 578 LEPKPALKVQRKGDV-FTIQVNPLK------DLTEIAPNEDPYVDCDPLVFKIIKKRSPE 420
L+ P KV K V +++ PLK + ++ P P + ++ +++KR E
Sbjct: 11827 LKAIPKKKVPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEE 11886
Query: 419 EQAKVEARKMVKLKK 375
E+ KVE +K+ K+KK
Sbjct: 11887 EEPKVEPKKLEKVKK 11901
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,840,680
Number of Sequences: 1657284
Number of extensions: 16046619
Number of successful extensions: 55458
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 52498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55381
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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