Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d15
(839 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 33 1.3
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein. 33 1.7
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 33 1.7
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 33 1.7
AF525413-1|AAP80791.1| 962|Homo sapiens cardiac titin N2BA isof... 33 1.7
AL591049-1|CAI14239.1| 124|Homo sapiens stromal membrane-associ... 31 3.9
AL354943-2|CAI12309.1| 124|Homo sapiens stromal membrane-associ... 31 3.9
AL121961-1|CAI42144.1| 124|Homo sapiens stromal membrane-associ... 31 3.9
BT006817-1|AAP35463.1| 387|Homo sapiens tetratricopeptide repea... 31 5.2
BC001276-1|AAH01276.1| 387|Homo sapiens tetratricopeptide repea... 31 5.2
AL139244-6|CAI18995.1| 398|Homo sapiens tetratricopeptide repea... 31 5.2
AL139244-5|CAI18994.1| 387|Homo sapiens tetratricopeptide repea... 31 5.2
AL139244-4|CAI18993.1| 133|Homo sapiens tetratricopeptide repea... 31 5.2
AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open read... 31 5.2
AK222562-1|BAD96282.1| 387|Homo sapiens tetratricopeptide repea... 31 5.2
AF149297-1|AAF34820.1| 704|Homo sapiens NAG-5 protein protein. 31 5.2
AF073887-1|AAD19853.1| 356|Homo sapiens tetratricopeptide repea... 31 5.2
AF070572-1|AAC28644.1| 585|Homo sapiens unknown protein. 31 5.2
AF063602-1|AAG43161.1| 387|Homo sapiens brain my044 protein pro... 31 5.2
AY393660-1|AAR02533.1| 156|Homo sapiens immunoglobulin heavy ch... 31 6.9
AB209575-1|BAD92812.1| 520|Homo sapiens glucose phosphate isome... 30 9.1
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = -1
Query: 578 LEPKPALKVQRKGDV-FTIQVNPLK------DLTEIAPNEDPYVDCDPLVFKIIKKRSPE 420
L+ P KV K V +++ PLK + ++ P P + ++ +++KR E
Sbjct: 11827 LKAIPKKKVPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEE 11886
Query: 419 EQAKVEARKMVKLKK 375
E+ KVE +K+ K+KK
Sbjct: 11887 EEPKVEPKKLEKVKK 11901
>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
Length = 7962
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 509 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 375
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 7617 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 7661
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 509 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 375
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 4433 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 4477
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 509 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 375
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 4433 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 4477
>AF525413-1|AAP80791.1| 962|Homo sapiens cardiac titin N2BA isoform
protein.
Length = 962
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -1
Query: 509 KDLTEIAPNEDPYVDCDPLVFKIIKKRSPEEQAKVEARKMVKLKK 375
K + ++ P P + ++ +++KR EE+ KVE +K+ K+KK
Sbjct: 819 KKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKVEPKKLEKVKK 863
>AL591049-1|CAI14239.1| 124|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 124
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -1
Query: 599 DSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPE 420
+ EP++P +P A K+Q+K Q+ P K T +P VD LV++ I+K E
Sbjct: 52 EKEPEKPAKPLTAEKLQKKDQ----QLEPKKS-TSPKKAAEPTVDLLGLVWRKIEKEKSE 106
Query: 419 EQ 414
Q
Sbjct: 107 RQ 108
>AL354943-2|CAI12309.1| 124|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 124
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -1
Query: 599 DSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPE 420
+ EP++P +P A K+Q+K Q+ P K T +P VD LV++ I+K E
Sbjct: 52 EKEPEKPAKPLTAEKLQKKDQ----QLEPKKS-TSPKKAAEPTVDLLGLVWRKIEKEKSE 106
Query: 419 EQ 414
Q
Sbjct: 107 RQ 108
>AL121961-1|CAI42144.1| 124|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 124
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = -1
Query: 599 DSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKIIKKRSPE 420
+ EP++P +P A K+Q+K Q+ P K T +P VD LV++ I+K E
Sbjct: 52 EKEPEKPAKPLTAEKLQKKDQ----QLEPKKS-TSPKKAAEPTVDLLGLVWRKIEKEKSE 106
Query: 419 EQ 414
Q
Sbjct: 107 RQ 108
>BT006817-1|AAP35463.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 387
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 107 KKKCADPDL 115
>BC001276-1|AAH01276.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 387
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 107 KKKCADPDL 115
>AL139244-6|CAI18995.1| 398|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 398
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 62 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 117
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 118 KKKCADPDL 126
>AL139244-5|CAI18994.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 387
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 107 KKKCADPDL 115
>AL139244-4|CAI18993.1| 133|Homo sapiens tetratricopeptide repeat
domain 4 protein.
Length = 133
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 107 KKKCADPDL 115
>AL133410-17|CAI10994.1| 702|Homo sapiens chromosome 9 open reading
frame 127 protein.
Length = 702
Score = 31.1 bits (67), Expect = 5.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 819 LRPGLPVPAQNGVAVECGRHSWSEAATWMAAWGHW 715
LRP P P N +V CG S + + WGHW
Sbjct: 290 LRPKAP-PLHNSSSVACGGASGCQLELALPPWGHW 323
>AK222562-1|BAD96282.1| 387|Homo sapiens tetratricopeptide repeat
domain 4 variant protein.
Length = 387
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 107 KKKCADPDL 115
>AF149297-1|AAF34820.1| 704|Homo sapiens NAG-5 protein protein.
Length = 704
Score = 31.1 bits (67), Expect = 5.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 819 LRPGLPVPAQNGVAVECGRHSWSEAATWMAAWGHW 715
LRP P P N +V CG S + + WGHW
Sbjct: 292 LRPKAP-PLHNSSSVACGGASGCQLELALPPWGHW 325
>AF073887-1|AAD19853.1| 356|Homo sapiens tetratricopeptide repeat
protein 4 protein.
Length = 356
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 107 KKKCADPDL 115
>AF070572-1|AAC28644.1| 585|Homo sapiens unknown protein.
Length = 585
Score = 31.1 bits (67), Expect = 5.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 819 LRPGLPVPAQNGVAVECGRHSWSEAATWMAAWGHW 715
LRP P P N +V CG S + + WGHW
Sbjct: 173 LRPKAP-PLHNSSSVACGGASGCQLELALPPWGHW 206
>AF063602-1|AAG43161.1| 387|Homo sapiens brain my044 protein
protein.
Length = 387
Score = 31.1 bits (67), Expect = 5.2
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 500 TEIAPNEDPYVDC-DPLVFKIIKKRSPEEQAKVEARKMVKLKKQRDAEIRKALAEAVEDI 324
+EI P E+P + C ++F ++RSPEEQAK + K++D +KA+ E +
Sbjct: 51 SEIDPRENPDLACLQSIIFD--EERSPEEQAKTYKDEGNDYFKEKD--YKKAVISYTEGL 106
Query: 323 -CKCAYMDV 300
KCA D+
Sbjct: 107 KKKCADPDL 115
>AY393660-1|AAR02533.1| 156|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 156
Score = 30.7 bits (66), Expect = 6.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 53 FLSTLEH-QRFQRRLVYTASPRVYTFFFSLAPNRNSQKVGYTQCPKSR-YWTM 205
F+ T +H Q+FQ R+ TA TF+ L+ R+ Y C K R W++
Sbjct: 50 FVGTTDHAQQFQGRVTITADKSTSTFYMELSSLRSDDTAVY-YCAKERGEWSL 101
>AB209575-1|BAD92812.1| 520|Homo sapiens glucose phosphate
isomerase variant protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 152 NSQKVGYTQCPKSRYWTMNLVIPRGIYTLVL*RLDNCL*PYRWQLDHYNRHP 307
N +K+ YT+ + + +P G+Y L + R+ CL P+ W + N P
Sbjct: 407 NGEKINYTEVSRPHIPSGASFLPFGVY-LTVSRITLCLHPFSWAMLLLNEGP 457
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,132,211
Number of Sequences: 237096
Number of extensions: 2546320
Number of successful extensions: 9544
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9536
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -