Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d13
(853 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 27 0.22
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 27 0.22
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 27 0.22
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 25 1.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 24 1.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 24 1.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 4.7
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 23 4.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.2
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 399 GRGSCTPTSSAPGRWRRSACDSCSAPTDSLSTPTSWTA 286
G + PTS P +R D P D+ + P +W A
Sbjct: 268 GVTAAIPTSENPADYRYFCPDGSKVPIDANTKPCTWAA 305
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 399 GRGSCTPTSSAPGRWRRSACDSCSAPTDSLSTPTSWTA 286
G + PTS P +R D P D+ + P +W A
Sbjct: 268 GVTAAIPTSENPADYRYFCPDGSKVPIDANTKPCTWAA 305
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 399 GRGSCTPTSSAPGRWRRSACDSCSAPTDSLSTPTSWTA 286
G + PTS P +R D P D+ + P +W A
Sbjct: 268 GVTAAIPTSENPADYRYFCPDGSKVPIDANTKPCTWAA 305
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 283 LQVLEKDENCNIYYEDLLKFLDFQTRPVFNLTE 185
L++ E + + Y+DLL + RPV N TE
Sbjct: 25 LKIFEANPDTKRLYDDLLSNYNRLIRPVMNNTE 57
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 24.2 bits (50), Expect = 1.5
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Frame = +2
Query: 251 VTVFVLFQYLQHAV--HEVGVDSESVGAEQLSQALRR--HRPGAELVGVHEPLPQPGAVV 418
VT+F F AV H+ E ++ L+R H+P + VH PGAVV
Sbjct: 476 VTLFTDFYVDLDAVTGHQSQQQQEEQTQSRVRAHLKRLDHQPYQYKIAVHSEQNVPGAVV 535
Query: 419 PQATGQLRKH-*RPNHFTSRAFLF 487
G H RP + LF
Sbjct: 536 RVFLGPKHDHQGRPISISKNQHLF 559
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 29 RLFFHKMFQVELAQECIPVDVAFLDEILVF 118
R F+HK Q+EL +E I D + L F
Sbjct: 153 RHFYHKELQIELVREEILFDTVHVTFKLTF 182
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 232 LKFLDFQTRPVFNLTEDDYQKVVRHAPPLKDTECKLWAE 116
L+F TR + D Y+K+ + PPL LW E
Sbjct: 273 LRFGCLSTRLFYYQLTDLYKKIKKAVPPLSLHGQLLWRE 311
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 4.7
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 244 YEDLLKFLDFQTRPVFNLTEDDYQKVVRHAPPLKDTECKLWAENENL 104
Y+DLL + RPV N+T+ K+ L D K NL
Sbjct: 29 YDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNL 75
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 22.6 bits (46), Expect = 4.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 205 PVFNLTEDDYQKVVRHAPPLKDTECK 128
PV LTE++ ++ P K+TE K
Sbjct: 39 PVVELTENNGLYTLKTTSPFKNTEIK 64
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 745 RYLELHSDEYPMANIALIMDKIRRFLASQENGYKN 641
RY +LH+++ + ++ R ++N YKN
Sbjct: 18 RYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 745 RYLELHSDEYPMANIALIMDKIRRFLASQENGYKN 641
RY +LH+++ + ++ R ++N YKN
Sbjct: 18 RYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 745 RYLELHSDEYPMANIALIMDKIRRFLASQENGYKN 641
RY +LH+++ + ++ R ++N YKN
Sbjct: 18 RYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 745 RYLELHSDEYPMANIALIMDKIRRFLASQENGYKN 641
RY +LH+++ + ++ R ++N YKN
Sbjct: 18 RYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 745 RYLELHSDEYPMANIALIMDKIRRFLASQENGYKN 641
RY +LH+++ + ++ R ++N YKN
Sbjct: 18 RYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 745 RYLELHSDEYPMANIALIMDKIRRFLASQENGYKN 641
RY +LH+++ + ++ R ++N YKN
Sbjct: 18 RYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -1
Query: 745 RYLELHSDEYPMANIALIMDKIRRFLASQENGYKN 641
RY +LH+++ + ++ R ++N YKN
Sbjct: 18 RYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKN 52
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,453
Number of Sequences: 438
Number of extensions: 5041
Number of successful extensions: 36
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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