Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d09
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   5.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 426 SLCGPPRPSKCGCPPKPGSGKVIVPPADCKPGP 328
           SL GP RP+ C    + G G V +   D    P
Sbjct: 134 SLTGPVRPAACTPDSRVGYGSVGLVGGDPASSP 166


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 459 LIWTVEKARRYSLCGP 412
           +IWTV+      LCGP
Sbjct: 350 MIWTVDMDDFLGLCGP 365


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 216 NALGHEPPPKGPCRDYE 166
           +A+   PPP  P  DYE
Sbjct: 84  DAVEKRPPPDEPIDDYE 100


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -3

Query: 459 LIWTVEKARRYSLCGPPRP 403
           + W ++    + LCGP  P
Sbjct: 367 MTWAIDMDDFHGLCGPKNP 385


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 351 PADCKPGPICYNPCVPRFHH 292
           PA  +P P  +NP   + HH
Sbjct: 25  PASVQPLPRHFNPPSDKLHH 44


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 218 KLCIAIKGNNTKYVKFLYF 274
           KL +A++ NNT    F YF
Sbjct: 173 KLVLALECNNTTAEGFTYF 191


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 218 KLCIAIKGNNTKYVKFLYF 274
           KL +A++ NNT    F YF
Sbjct: 173 KLVLALECNNTTAEGFTYF 191


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 218 KLCIAIKGNNTKYVKFLYFF 277
           KL +A++ NN+    F YFF
Sbjct: 175 KLVLALECNNSTSEGFDYFF 194


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 218 KLCIAIKGNNTKYVKFLYFF 277
           KL +A++ NN+    F YFF
Sbjct: 175 KLVLALECNNSTSEGFDYFF 194


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 218 KLCIAIKGNNTKYVKFLYFF 277
           KL +A++ NN+    F YFF
Sbjct: 175 KLVLALECNNSTSEGFDYFF 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,824
Number of Sequences: 336
Number of extensions: 3535
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)