Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d07
         (384 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8EZJ8 Cluster: Pirin-related protein; n=33; Bacteria|R...    31   9.9  
UniRef50_A6RX90 Cluster: Predicted protein; n=2; Sclerotiniaceae...    31   9.9  

>UniRef50_Q8EZJ8 Cluster: Pirin-related protein; n=33; Bacteria|Rep:
           Pirin-related protein - Leptospira interrogans
          Length = 301

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 198 SGTAEDSKPIGIFRKAPGWGRGLRTW*NITMSDGFSSPLFLST 326
           SG      P   F+K  GW  G + W N+  S   S P +  T
Sbjct: 107 SGLVHSELPSNEFQKNGGWMHGFQLWVNLPSSQKMSRPRYQDT 149


>UniRef50_A6RX90 Cluster: Predicted protein; n=2;
           Sclerotiniaceae|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 347

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = -1

Query: 270 SATLSPSLELS*RFQLASSPRRF-HFSTSIYRIYVQKVW*LDVWQRLPSDTKSYKETSKR 94
           SATLSP+   S   ++ SSP ++ + +TSI                 PS  +S   +   
Sbjct: 197 SATLSPTSSNS---EIMSSPTQYSNTNTSISTSQSNSN------STTPSSDRSTSNSPPS 247

Query: 93  VKEKYLSVLIML*FTKRFEFKVYYMIYTMP 4
            + +Y  ++    F+KRFEF  +  ++T+P
Sbjct: 248 TQNEYTCIICSKTFSKRFEFNKHKPLHTLP 277


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,107,759
Number of Sequences: 1657284
Number of extensions: 6318368
Number of successful extensions: 15053
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15051
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)