Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d07
(384 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 24 0.60
DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory pro... 22 1.8
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 4.2
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 4.2
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 4.2
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 5.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 7.4
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 20 7.4
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 20 9.7
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 20 9.7
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 20 9.7
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 23.8 bits (49), Expect = 0.60
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 167 KKFGSWMFGKGCHRTQNLTKKPQNEL 90
+K S G H+T +L K P+N L
Sbjct: 262 EKKSSIQHGDDAHKTHHLDKNPENTL 287
>DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory
protein 5 protein.
Length = 144
Score = 22.2 bits (45), Expect = 1.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 200 TLVLAFIGFMYKKFGSWMFGKGCHRT 123
T V+ F G + F ++ GK HR+
Sbjct: 3 TFVILFFGVFFIIFSDFVNGKTLHRS 28
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 266 ADLVKHYYV*WLFVSSLPQ 322
A ++ HY V WL +S L Q
Sbjct: 221 AYIIAHYRVLWLSLSDLLQ 239
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 266 ADLVKHYYV*WLFVSSLPQ 322
A ++ HY V WL +S L Q
Sbjct: 221 AYIIAHYRVLWLSLSDLLQ 239
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 266 ADLVKHYYV*WLFVSSLPQ 322
A ++ HY V WL +S L Q
Sbjct: 221 AYIIAHYRVLWLSLSDLLQ 239
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 20.6 bits (41), Expect = 5.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 166 KSLVVGCLAKVAIGHK 119
K ++V CLA +A+G K
Sbjct: 4 KPILVLCLATLALGQK 19
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 20.2 bits (40), Expect = 7.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 197 KWNRRGLEANW 229
KWN GL+ +W
Sbjct: 1509 KWNFDGLDLDW 1519
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 239 ESSRLGERVADLVKHYYV 292
+S + V+D ++HYYV
Sbjct: 485 DSVACSKTVSDGIRHYYV 502
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 19.8 bits (39), Expect = 9.7
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -3
Query: 265 NPLPQPGAFLKIPIGFESSAV 203
+P PQ G+ P+G+ + V
Sbjct: 387 SPYPQIGSERATPVGYHQNEV 407
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 19.8 bits (39), Expect = 9.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 127 RWQPLPNIQLPN 162
+W+ + NIQ PN
Sbjct: 605 QWENVTNIQCPN 616
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 19.8 bits (39), Expect = 9.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 181 INASTKVEPPRTR 219
INA V PP+T+
Sbjct: 64 INAFANVSPPKTK 76
Score = 19.8 bits (39), Expect = 9.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 127 RWQPLPNIQLPN 162
+W+ + NIQ PN
Sbjct: 605 QWENVTNIQCPN 616
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,363
Number of Sequences: 336
Number of extensions: 1754
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8014124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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