Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d05
         (815 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P52183 Cluster: Annulin; n=8; Neoptera|Rep: Annulin - S...    39   0.13 
UniRef50_UPI0000DB70E5 Cluster: PREDICTED: similar to CG7356-PA,...    36   0.92 
UniRef50_Q30P80 Cluster: Sensor protein; n=1; Thiomicrospira den...    36   1.2  
UniRef50_A0D5J1 Cluster: Chromosome undetermined scaffold_39, wh...    34   3.7  
UniRef50_Q2S757 Cluster: Putative uncharacterized protein; n=1; ...    34   4.9  
UniRef50_UPI00006CFB39 Cluster: hypothetical protein TTHERM_0047...    33   6.5  
UniRef50_Q7RHA8 Cluster: Putative uncharacterized protein PY0408...    33   8.6  
UniRef50_A2DIH5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_P52183 Cluster: Annulin; n=8; Neoptera|Rep: Annulin -
           Schistocerca americana (American grasshopper)
          Length = 772

 Score = 39.1 bits (87), Expect = 0.13
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
 Frame = -2

Query: 571 IAVAAVLQLSNADITNLLKYIKTRLFENSMLKDDLLKGKSMGVGFALLRPFND--KQYRV 398
           I+  AV +    DITN  KY +  + E + +   L + +S+   + L   FND    + +
Sbjct: 496 ISTKAVGRFQREDITNTYKYPEKSVEERAAMLKALRQSESLFSRYYLNEDFNDIHFNFEL 555

Query: 397 MERIVISSPTKCLTTVKKRKDEKIFNAPPIKRTKKIL 287
            + IVI SP   +  +K R +++ +    + R   +L
Sbjct: 556 RDDIVIGSPFSVVVVMKNRSNQQDYTVTVLLRVDTVL 592


>UniRef50_UPI0000DB70E5 Cluster: PREDICTED: similar to CG7356-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG7356-PA, isoform A - Apis mellifera
          Length = 546

 Score = 36.3 bits (80), Expect = 0.92
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = -2

Query: 571 IAVAAVLQLSNADITNLLKYIKTRLFENSMLKDDLLKGKSMGVGFALLRPFNDK--QYRV 398
           I+  AV + +  DIT+  KY +    E + +   L + +S+   + L   FND    + +
Sbjct: 278 ISTKAVGKWTREDITHTYKYPEKSEEERATMLKALRQSQSLFSRYYLNDEFNDVTFDFEL 337

Query: 397 MERIVISSPTKCLTTVKKRKDEKIFNAPPIKRTKKIL 287
            + IVI  P   + ++K R D   +    I R + +L
Sbjct: 338 RDDIVIGQPFSVVLSIKNRSDRNEYEVSVILRVETVL 374


>UniRef50_Q30P80 Cluster: Sensor protein; n=1; Thiomicrospira
           denitrificans ATCC 33889|Rep: Sensor protein -
           Thiomicrospira denitrificans (strain ATCC 33889 / DSM
           1351)
          Length = 775

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 25/91 (27%), Positives = 45/91 (49%)
 Frame = -2

Query: 760 LLEALERNAVWLNTLVGNQNNFKCALMVGAGPNRFQIQEIIYPARNNNVKLEVELKDSED 581
           ++E L    +W+ + VG  + F  A+ +     +    EI     ++N KL + ++DSE+
Sbjct: 616 IVEDLHGGKIWVESSVGEGSCFYIAVPIQTELTKI---EIFASKNSDNEKLLI-VEDSEE 671

Query: 580 HDKIAVAAVLQLSNADITNLLKYIKTRLFEN 488
           + KI V  +L   N  +TN +   K  L +N
Sbjct: 672 YVKILVEKLLPYYNITVTNSINKAKELLEKN 702


>UniRef50_A0D5J1 Cluster: Chromosome undetermined scaffold_39, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_39,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 880

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -2

Query: 520 LKYIKTRLFENSMLKDDLLKGKSMGVGFALLRPFNDKQYRVM---ERIVISSPTKCLTTV 350
           LKY+K RL   S+L  D L GK   +   ++ PFN K   V+   +R++I    K +  +
Sbjct: 307 LKYVKNRLIHYSLLLIDYLLGKYKQLKQNVISPFNLKVNEVLKKIKRLIIDISLKTIDLI 366

Query: 349 K 347
           K
Sbjct: 367 K 367


>UniRef50_Q2S757 Cluster: Putative uncharacterized protein; n=1;
           Hahella chejuensis KCTC 2396|Rep: Putative
           uncharacterized protein - Hahella chejuensis (strain
           KCTC 2396)
          Length = 564

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 28/85 (32%), Positives = 40/85 (47%)
 Frame = -2

Query: 814 AAITSYKXQIEISEFINFLLEALERNAVWLNTLVGNQNNFKCALMVGAGPNRFQIQEIIY 635
           AA   Y+ Q E+ E +   L   E+N    N L+G  N F C ++ G G N  Q  E +Y
Sbjct: 451 AASRWYRRQNEVPERLQAELRGFEQNLQ--NWLLG-VNPFNCCMLEGVGHNNPQYSE-LY 506

Query: 634 PARNNNVKLEVELKDSEDHDKIAVA 560
           PA    +   V    S  HD++ +A
Sbjct: 507 PASKGGICNGV---TSSLHDEMDIA 528


>UniRef50_UPI00006CFB39 Cluster: hypothetical protein
           TTHERM_00471930; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00471930 - Tetrahymena
           thermophila SB210
          Length = 820

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
 Frame = -2

Query: 808 ITSYKXQIEISEFINFLLEALERNAVWLNTLVG--NQNNFKCALMVGAGPNRF--QIQEI 641
           + S+  Q E SEF+NFL + + ++A ++N  V   N+            PN F  +  EI
Sbjct: 449 VYSFMNQQEASEFLNFLKKQMHKSANFINEYVFYLNEMYVFAEFQFSKNPNTFENEFYEI 508

Query: 640 IYPARNNNVKLEVELKDSEDHDKI 569
            Y    +    ++ L  S+ +D++
Sbjct: 509 CYHLFESTTNTKLSLLYSKQNDEV 532


>UniRef50_Q7RHA8 Cluster: Putative uncharacterized protein PY04081;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04081 - Plasmodium yoelii yoelii
          Length = 1737

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
 Frame = -2

Query: 769 INFLLEALERNAVWLNTLVGNQNNFKC---ALMVGAGPNRFQIQEIIYPARNNNVKLEVE 599
           +N  +E L  N + L   + N+NN       + +G+  N  + +E      N N K  ++
Sbjct: 673 VNNKIECLNENLIDLKNNIENENNNNNNSNVIKLGSVHNNDKTEEERGNIGNENEK--ID 730

Query: 598 LKDSEDHDKIAVAAVLQLSNA---DITNLLKYIKTRLFENSMLKDDL 467
           LKDS+ +DK+    +  L N    D+ NL  Y     F   +LK+++
Sbjct: 731 LKDSDGYDKLLKNDMYDLYNIKMHDLNNLKSY--DFEFSKKLLKNEI 775


>UniRef50_A2DIH5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 858

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 22/81 (27%), Positives = 37/81 (45%)
 Frame = -2

Query: 475 DDLLKGKSMGVGFALLRPFNDKQYRVMERIVISSPTKCLTTVKKRKDEKIFNAPPIKRTK 296
           DDL K  +  +GF   +P    Q      ++I+  TK L  ++++  E   NA   +   
Sbjct: 318 DDLKKQINTIIGFDHFQPMQKLQ------LIINEITKSLNNLQQKAKESTQNAETFENDN 371

Query: 295 KILT*NYETRDFNTNSLCIKW 233
           KIL  NY   +   ++L  +W
Sbjct: 372 KILKENYNKSNILLSTLAREW 392


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,500,271
Number of Sequences: 1657284
Number of extensions: 14903593
Number of successful extensions: 35383
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35372
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)