Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10d05
(815 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 30 0.025
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 0.72
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 0.72
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 3.8
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 22 5.1
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 6.7
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 6.7
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 6.7
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 6.7
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 21 8.9
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 8.9
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 8.9
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 29.9 bits (64), Expect = 0.025
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = -2
Query: 679 VGAGPNRFQIQEIIYPARNNNVKLEVELKDSEDHDKIAVAAVLQLSNADITNLLKYIKTR 500
+G G N +Q P NN +++ K D+ + + + A I N L +KT
Sbjct: 1 MGTGTNNTPVQPNAIPTTNNQIEMAAATKRVSDNRRSNKPIMEKRRRARINNSLNELKT- 59
Query: 499 LFENSMLKD 473
L ++M KD
Sbjct: 60 LILDAMKKD 68
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 25.0 bits (52), Expect = 0.72
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 781 ISEFINFLLEALERNAVWLNTLVGNQNNFKCALMVGAGPNR 659
+ FIN L + +A ++NT++G+QN + + NR
Sbjct: 370 VYSFINNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNR 410
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 25.0 bits (52), Expect = 0.72
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 781 ISEFINFLLEALERNAVWLNTLVGNQNNFKCALMVGAGPNR 659
+ FIN L + +A ++NT++G+QN + + NR
Sbjct: 262 VYSFINNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNR 302
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 236 FYAQTVCVKISSFVILSKDLFCTLYRRC 319
F +V + +S V ++ CTL RC
Sbjct: 717 FKITSVMIAVSGLVYIATVWICTLMNRC 744
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 22.2 bits (45), Expect = 5.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 674 SWPEPIPDPRNHL-PSTE*QCKIRSRAERL*RSRQNSSGRSLAT 546
S PE P L PS + +R+RAE++ R + NS LAT
Sbjct: 12 SAPEACVSPEGSLLPSNSRE--MRNRAEKMRRDKLNSYIGELAT 53
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -2
Query: 427 RPFNDKQYRVMERIVISSPTKCLTTVKKRKDEKIF 323
+P + +RV + V+ SP+ ++ + R E +F
Sbjct: 267 QPLDLYNFRVPQHQVLQSPSSTSSSPEPRSPESLF 301
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 6.7
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -2
Query: 646 EIIYPARNNNVKLEVELKDSEDHDKIA--VAAVLQLSNADITNLLKYIKTRLFENSMLKD 473
E I P N ++ +L+D E KI +LS L+ R+F N ++K
Sbjct: 346 EYIPPILYYNYTVDRDLQD-EVSQKIRKYYLGEKKLSKKTFRELVAMFSDRIFINDIVKT 404
Query: 472 DLLKGKSM 449
L KSM
Sbjct: 405 AKLMAKSM 412
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 6.7
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -2
Query: 646 EIIYPARNNNVKLEVELKDSEDHDKIA--VAAVLQLSNADITNLLKYIKTRLFENSMLKD 473
E I P N ++ +L+D E KI +LS L+ R+F N ++K
Sbjct: 346 EYIPPILYYNYTVDRDLQD-EVSQKIRKYYLGEKKLSKKTFRELVAMFSDRIFINDIVKT 404
Query: 472 DLLKGKSM 449
L KSM
Sbjct: 405 AKLMAKSM 412
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 550 QLSNADITNLLKYIKTRLFENSMLKDDLLKGKSM 449
+LS +L+ R+F N ++K L KSM
Sbjct: 379 KLSKKTFRDLVAMFSDRIFINDIVKTAKLMAKSM 412
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 471 SSFNIEFSNRRVLMYFKRLV 530
S+F I F N ++YF R++
Sbjct: 322 SNFEIGFENYYNILYFSRIM 341
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 550 QLSNADITNLLKYIKTRLFENSMLKDDLLKGKSM 449
+LS L+ R+F N ++K L KSM
Sbjct: 379 KLSKKTFRELVTMFSDRIFINDIVKTAKLMAKSM 412
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 550 QLSNADITNLLKYIKTRLFENSMLKDDLLKGKSM 449
+LS L+ R+F N ++K L KSM
Sbjct: 379 KLSKRTFRELVAMFSDRIFINDIVKTAKLMAKSM 412
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,367
Number of Sequences: 336
Number of extensions: 3845
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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