Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10d05
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    26   1.2  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    25   2.8  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    23   8.5  

>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -1

Query: 815 GCNNILQKXDRNK*IHKLPFRSTGA*CRMAEYSSWEPEQFQMCLNGW 675
           G NNI+++ +++     +P+  T     ++  +  E EQF+ C  GW
Sbjct: 541 GVNNIVRRSEQSS--VTIPYERTFRPMALSNINLPETEQFRFCNCGW 585


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -1

Query: 815 GCNNILQKXDRNK*IHKLPFRSTGA*CRMAEYSSWEPEQFQMCLNGW 675
           G NNI+++ +++     +P+  T     ++  +    EQF+ C  GW
Sbjct: 540 GTNNIVRRSEQSS--VTIPYERTFRQVALSNINEPSTEQFRFCNCGW 584


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 192 WTQFGLIVKRSSIVNY 145
           W++FGL++ R S V Y
Sbjct: 379 WSKFGLVLNRLSFVVY 394


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,865
Number of Sequences: 2352
Number of extensions: 16083
Number of successful extensions: 61
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)